Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5438

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5436: 13804 - Hypothetical Protein, at 94082 to 95346 13804 mRNA_5437: 13805 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 95349 to 95702 13805 mRNA_5438: 13806 - K06867 K06867 uncharacterized protein, at 96047 to 99541 13806 mRNA_5439: 13807 - Hypothetical Protein, at 99970 to 100789 13807

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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95,691 + 0.3
95,703 + 0.5
95,944 + 0.7
95,957 - 0.4
96,077 - -0.2
96,094 - 0.5
96,363 - 0.3
96,831 + 13806 mRNA_5438 0.22 -3.1
96,996 + 13806 mRNA_5438 0.27 1.9
97,044 + 13806 mRNA_5438 0.29 0.0
97,302 + 13806 mRNA_5438 0.36 -1.1
97,392 + 13806 mRNA_5438 0.38 0.2
97,414 + 13806 mRNA_5438 0.39 -1.0
97,522 - 13806 mRNA_5438 0.42 -0.5
97,523 + 13806 mRNA_5438 0.42 -0.6
97,536 - 13806 mRNA_5438 0.43 -0.5
97,692 - 13806 mRNA_5438 0.47 -0.1
97,809 + 13806 mRNA_5438 0.50 -0.6
98,238 + 13806 mRNA_5438 0.63 0.1
98,427 + 13806 mRNA_5438 0.68 0.1
98,561 - 13806 mRNA_5438 0.72 0.1
98,576 + 13806 mRNA_5438 0.72 0.7
98,582 + 13806 mRNA_5438 0.73 0.8
98,721 - 13806 mRNA_5438 0.77 0.2
98,854 - 13806 mRNA_5438 0.80 -0.1
98,940 + 13806 mRNA_5438 0.83 -0.1
98,964 - 13806 mRNA_5438 0.83 -0.2
98,975 - 13806 mRNA_5438 0.84 -0.5
99,163 - 13806 mRNA_5438 0.89 -0.1
99,182 + 13806 mRNA_5438 0.90 0.6
99,253 - 0.9
99,299 - -0.5
99,543 - 1.4
99,846 + 0.1
99,855 + -0.1
99,909 + -1.6
99,912 - 0.1
100,026 - -0.2
100,046 + -0.3
100,058 - 13807 mRNA_5439 0.11 0.5