Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5356

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528970 to 530546 13723 mRNA_5356: 13724 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 531177 to 533794 13724 mRNA_5357: 13725 - HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335, at 533948 to 534977 13725

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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530,182 - 13723 mRNA_5355 0.77 0.3
530,668 + 0.1
530,818 - -0.9
530,938 + -1.4
530,956 - 0.8
531,075 + 1.4
531,106 + 0.5
531,905 - 13724 mRNA_5356 0.28 -1.0
532,766 - 13724 mRNA_5356 0.61 -0.1
532,822 - 13724 mRNA_5356 0.63 -0.9
532,873 - 13724 mRNA_5356 0.65 -1.4
532,874 + 13724 mRNA_5356 0.65 -0.9
532,876 - 13724 mRNA_5356 0.65 -2.2
532,887 - 13724 mRNA_5356 0.65 0.3
532,893 + 13724 mRNA_5356 0.66 0.6
532,894 - 13724 mRNA_5356 0.66 1.7
532,897 + 13724 mRNA_5356 0.66 -0.3
532,902 + 13724 mRNA_5356 0.66 -0.7
532,904 - 13724 mRNA_5356 0.66 0.7
532,915 + 13724 mRNA_5356 0.66 -1.0
532,916 + 13724 mRNA_5356 0.66 0.1
533,038 - 13724 mRNA_5356 0.71 0.2
533,048 + 13724 mRNA_5356 0.71 -0.4
533,132 - 13724 mRNA_5356 0.75 -0.8
533,218 + 13724 mRNA_5356 0.78 0.9
533,229 - 13724 mRNA_5356 0.78 0.0
533,236 - 13724 mRNA_5356 0.79 -0.3
533,240 + 13724 mRNA_5356 0.79 0.5
533,364 - 13724 mRNA_5356 0.84 -0.2
533,565 + -0.7
533,565 - -0.6
533,648 - -1.4
533,651 - 0.1
533,676 - -0.5
533,833 + -3.3
533,954 - -1.2
534,377 + 13725 mRNA_5357 0.42 0.3
534,442 + 13725 mRNA_5357 0.48 0.3
534,554 + 13725 mRNA_5357 0.59 -0.2
534,670 - 13725 mRNA_5357 0.70 -0.4
534,688 + 13725 mRNA_5357 0.72 -0.9