Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5317

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5316: 13684 - Hypothetical Protein, at 440018 to 441628 13684 mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441871 to 444778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444861 to 446150 13686

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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441,095 - 13684 mRNA_5316 0.67 0.0
441,107 + 13684 mRNA_5316 0.68 1.2
441,203 - 13684 mRNA_5316 0.74 -0.3
441,234 - 13684 mRNA_5316 0.75 1.7
441,321 - 13684 mRNA_5316 0.81 -0.1
441,429 + 13684 mRNA_5316 0.88 0.8
441,548 - 1.1
441,551 + 1.1
441,554 - -1.5
441,750 + 0.8
441,967 + 1.3
442,128 + -0.6
442,146 + -0.4
442,289 - 13685 mRNA_5317 0.14 0.2
442,296 - 13685 mRNA_5317 0.15 1.6
442,578 - 13685 mRNA_5317 0.24 -0.8
442,618 + 13685 mRNA_5317 0.26 -0.3
442,734 + 13685 mRNA_5317 0.30 0.5
442,748 - 13685 mRNA_5317 0.30 -0.7
442,750 + 13685 mRNA_5317 0.30 -0.8
442,751 - 13685 mRNA_5317 0.30 0.2
442,757 + 13685 mRNA_5317 0.30 0.7
442,871 - 13685 mRNA_5317 0.34 0.2
443,150 - 13685 mRNA_5317 0.44 -0.7
443,152 - 13685 mRNA_5317 0.44 -1.3
443,211 + 13685 mRNA_5317 0.46 0.2
444,765 - 0.2
445,052 - 13686 mRNA_5318 0.15 0.3