Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5229

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5228: 13596 - HMMPfam-Mis6-PF07778, at 203109 to 206278 13596 mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206396 to 208003 13597

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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205,429 + 13596 mRNA_5228 0.73 0.4
205,432 - 13596 mRNA_5228 0.73 1.0
205,515 - 13596 mRNA_5228 0.76 -0.1
205,523 + 13596 mRNA_5228 0.76 0.6
205,531 + 13596 mRNA_5228 0.76 1.1
205,782 - 13596 mRNA_5228 0.84 0.6
205,828 - 13596 mRNA_5228 0.86 -0.3
205,876 + 13596 mRNA_5228 0.87 0.1
206,078 - -1.5
206,100 + -0.9
206,135 - -0.2
206,140 + -1.1
206,250 - -0.2
206,252 - 0.6
206,414 - -1.7
206,416 - 0.3
206,716 - 13597 mRNA_5229 0.20 1.2
206,752 + 13597 mRNA_5229 0.22 -0.1
206,755 + 13597 mRNA_5229 0.22 -0.2
206,833 - 13597 mRNA_5229 0.27 1.0
206,863 - 13597 mRNA_5229 0.29 -0.1
206,895 + 13597 mRNA_5229 0.31 -1.2
206,983 - 13597 mRNA_5229 0.37 -0.3
207,125 + 13597 mRNA_5229 0.45 0.2
207,167 - 13597 mRNA_5229 0.48 -0.6
207,204 + 13597 mRNA_5229 0.50 -2.0
207,475 - 13597 mRNA_5229 0.67 -0.8
207,572 + 13597 mRNA_5229 0.73 -1.0
207,575 + 13597 mRNA_5229 0.73 1.3
207,728 + 13597 mRNA_5229 0.83 -0.5
207,772 - 13597 mRNA_5229 0.86 0.8
207,828 - 13597 mRNA_5229 0.89 -0.1
208,006 - 0.3
208,020 - 0.4
208,056 + -0.8
208,292 + -1.1
208,306 - -0.3
208,778 + -0.1
208,793 + -0.9
208,812 + -0.3
208,922 - 0.2
208,964 + -0.2