Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5213

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5212: 13580 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 159635 to 162568 13580 mRNA_5213: 13581 - Hypothetical Protein, at 163193 to 164200 13581 mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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162,534 - -0.1
162,659 + -2.8
162,665 - -0.5
162,667 + -0.5
162,673 - 0.3
162,673 + -0.4
162,673 + -0.2
162,684 - -0.2
162,686 + -0.3
162,688 + -0.4
162,690 - 0.7
162,709 - 0.3
162,712 + -0.5
162,713 - -0.6
162,713 - -0.7
162,713 + -0.2
162,716 + 0.1
162,718 + -0.1
162,720 + -1.1
162,742 - -0.4
162,748 + -0.0
162,761 - 0.4
162,779 - -1.6
162,782 - -0.6
162,792 - -0.0
162,806 - -0.8
162,807 - 1.7
162,822 + -0.7
162,835 - -0.2
162,863 + 0.1
162,879 + -0.4
162,981 + -0.5
163,070 - -0.5
163,385 + 13581 mRNA_5213 0.19 -0.1
163,453 - 13581 mRNA_5213 0.26 0.3
163,668 + 13581 mRNA_5213 0.47 -0.1
163,734 + 13581 mRNA_5213 0.54 0.7
163,948 + 13581 mRNA_5213 0.75 0.3
163,995 + 13581 mRNA_5213 0.80 1.8
164,058 + 13581 mRNA_5213 0.86 -1.3
164,492 - -0.3
164,788 + 13582 mRNA_5214 0.19 0.2
164,857 - 13582 mRNA_5214 0.22 -0.9
164,941 - 13582 mRNA_5214 0.26 0.2
164,967 - 13582 mRNA_5214 0.28 -0.0
164,995 + 13582 mRNA_5214 0.29 1.2