Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5192

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5191: 13559 - KOG4826 C-8,7 sterol isomerase, at 116613 to 117622 13559 mRNA_5192: 13560 - KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family), at 117744 to 118664 13560 mRNA_5193: 13561 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 119123 to 121882 13561

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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116,814 + 13559 mRNA_5191 0.20 0.3
116,933 - 13559 mRNA_5191 0.32 -0.3
116,985 - 13559 mRNA_5191 0.37 1.4
117,106 + 13559 mRNA_5191 0.49 0.1
117,132 - 13559 mRNA_5191 0.51 -0.3
117,279 + 13559 mRNA_5191 0.66 0.2
117,688 - 0.2
117,707 - 0.6
117,709 - 0.2
117,858 - 13560 mRNA_5192 0.12 -1.2
117,859 + 13560 mRNA_5192 0.12 -0.4
118,165 + 13560 mRNA_5192 0.46 -2.4
118,169 + 13560 mRNA_5192 0.46 -0.8
118,730 + -0.3
118,734 - -0.1