Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5172

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5172: 13540 - BLAST similar to An11g07040 [Aspergillus kawachii IFO 4308], at 70106 to 71183 13540

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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69,193 - -0.3
69,193 - -2.2
69,200 + -0.5
69,208 - -1.5
69,327 - 0.8
69,331 - -0.2
69,333 - 0.2
69,337 - -1.0
69,338 + -0.3
69,351 + -2.4
69,355 + 1.0
69,462 - 0.0
69,476 + 0.5
69,499 + 0.5
69,500 - -0.4
69,502 + -1.1
69,503 - -0.1
69,511 + 0.4
69,519 + -0.0
69,643 - 0.6
69,643 + 0.2
69,643 + 1.0
69,645 + -1.3
69,646 - 0.7
69,650 - -0.6
69,652 + -1.1
69,652 + 0.0
69,653 + -0.2
69,653 + -1.3
69,656 + 0.4
69,676 + 0.6
69,690 + 0.3
69,694 + 1.4
69,696 + 0.6
69,698 - -0.3
69,710 - 0.0
69,730 - -0.0
69,732 + -1.2
69,734 + -0.6
69,737 - -0.9
69,742 + 1.5
69,746 + -0.8
69,749 + -1.5
69,761 + 1.4
69,762 + -0.7
69,770 - 0.1
69,779 - -0.5
69,782 + -1.7
69,788 + -1.0
69,840 - 0.2
69,853 - -0.5
69,864 + -0.6
70,124 + 0.7
70,141 + 0.3
70,147 - -1.3
70,148 + -0.1
70,161 + -0.9
70,163 - -0.7
70,164 + 0.3
70,274 - 13540 mRNA_5172 0.16 0.0
70,278 - 13540 mRNA_5172 0.16 1.0
70,323 - 13540 mRNA_5172 0.20 0.4
70,427 - 13540 mRNA_5172 0.30 0.3
70,457 - 13540 mRNA_5172 0.33 0.2
70,508 + 13540 mRNA_5172 0.37 -0.3
70,550 + 13540 mRNA_5172 0.41 -0.6
70,551 - 13540 mRNA_5172 0.41 -0.0
70,554 + 13540 mRNA_5172 0.42 -0.1
70,558 - 13540 mRNA_5172 0.42 -0.4
70,603 - 13540 mRNA_5172 0.46 -0.7
70,621 - 13540 mRNA_5172 0.48 -0.7
70,621 - 13540 mRNA_5172 0.48 0.7
70,687 - 13540 mRNA_5172 0.54 -0.8
70,702 - 13540 mRNA_5172 0.55 0.5
70,709 + 13540 mRNA_5172 0.56 -0.6
70,762 - 13540 mRNA_5172 0.61 -0.8
70,797 + 13540 mRNA_5172 0.64 -0.4
70,811 + 13540 mRNA_5172 0.65 0.3
70,825 - 13540 mRNA_5172 0.67 0.0
70,831 + 13540 mRNA_5172 0.67 -0.0
70,842 - 13540 mRNA_5172 0.68 0.2
70,863 + 13540 mRNA_5172 0.70 0.8
70,863 - 13540 mRNA_5172 0.70 0.3
70,863 + 13540 mRNA_5172 0.70 -0.2
70,872 - 13540 mRNA_5172 0.71 -1.2
70,876 - 13540 mRNA_5172 0.71 -2.1
70,876 + 13540 mRNA_5172 0.71 0.3
70,877 + 13540 mRNA_5172 0.72 0.8
70,880 + 13540 mRNA_5172 0.72 0.2
70,887 + 13540 mRNA_5172 0.72 -1.4
70,890 - 13540 mRNA_5172 0.73 0.4
70,894 - 13540 mRNA_5172 0.73 0.7
70,895 + 13540 mRNA_5172 0.73 2.0
70,896 - 13540 mRNA_5172 0.73 -0.4
70,896 - 13540 mRNA_5172 0.73 0.1
70,898 + 13540 mRNA_5172 0.73 0.5
70,919 - 13540 mRNA_5172 0.75 0.7
70,928 + 13540 mRNA_5172 0.76 -0.8
70,932 + 13540 mRNA_5172 0.77 -0.8
70,935 + 13540 mRNA_5172 0.77 -0.5
70,941 - 13540 mRNA_5172 0.77 0.2
70,954 + 13540 mRNA_5172 0.79 -0.3
70,993 - 13540 mRNA_5172 0.82 -0.6
70,997 - 13540 mRNA_5172 0.83 -0.0
71,023 + 13540 mRNA_5172 0.85 1.2
71,024 + 13540 mRNA_5172 0.85 -1.1
71,038 + 13540 mRNA_5172 0.86 1.1
71,042 + 13540 mRNA_5172 0.87 0.1
71,042 + 13540 mRNA_5172 0.87 0.6
71,048 - 13540 mRNA_5172 0.87 -1.8
71,065 + 13540 mRNA_5172 0.89 0.2
71,074 + 13540 mRNA_5172 0.90 0.3
71,121 - -0.4
71,166 + 0.2
71,171 + -0.1
71,172 + 1.8
71,205 - 1.5
71,291 - -0.9
71,304 - -1.1
71,306 + -0.8
71,308 - -0.5
71,309 + 1.3
71,310 + 0.4
71,312 - 0.6
71,316 + -0.7
71,317 + 0.1
71,318 + 0.5
71,319 + -0.4
71,320 + -0.7
71,321 - 0.6
71,322 - 0.6
71,322 + 0.3
71,327 + 0.1
71,327 - 0.0
71,330 - -0.0
71,332 - -0.3
71,337 + -1.3
71,338 - -0.1
71,338 + -0.9
71,338 + -0.2
71,342 + 0.4
71,343 - 0.1
71,345 - 0.9
71,346 + -0.4
71,347 + 0.4
71,347 + 0.2
71,348 - -1.0
71,348 + -2.3
71,349 - -2.1
71,350 + 0.6
71,350 - 0.1
71,351 - 0.1
71,352 + 0.1
71,352 + -0.5
71,352 + -0.2
71,354 + -1.2
71,355 - 0.3
71,355 - 0.1
71,360 - 0.1
71,363 + 0.0
71,365 + 0.2
71,367 + -0.3
71,367 + -0.3
71,368 - -0.1
71,369 + -0.7
71,369 + -0.2
71,371 + 2.0
71,372 + 0.2
71,374 - -1.2
71,374 - -1.1
71,396 - 0.8
71,397 + 0.9
71,405 - -0.4
71,410 + -0.5
71,413 + -1.0
71,414 + 0.4
71,414 - 0.2
71,416 - 0.2
71,417 + -1.2
71,418 - -0.3
71,419 - -0.8
71,422 + 1.0
71,430 + -0.3
71,430 + -0.0
71,432 + 0.5
71,432 - 1.0
71,433 - 0.7
71,435 - -0.6
71,435 - -1.0
71,435 + 0.1
71,436 - 0.6
71,436 - -0.1
71,436 + -1.1
71,441 + -1.5
71,441 + 0.1
71,443 - -0.1
71,444 + -2.2
71,450 + 0.6
71,451 + -0.9
71,451 + 0.7
71,452 - 0.0
71,452 + 0.1
71,452 + 0.0
71,456 + 1.2
71,458 + 0.3
71,459 - -0.4
71,463 - 0.3
71,465 - -0.1
71,473 - 0.6
71,482 - -1.0
71,504 + -1.6
71,513 - 0.3
71,530 - 0.8
71,531 - 0.9
71,534 - 0.4
71,543 + 0.2
71,544 - 1.0
71,544 - -0.2
71,559 - -1.1
71,560 - -1.1
71,560 - 0.5
71,568 + -1.1
71,574 + 0.2
71,575 - 1.1
71,577 - -0.5
71,581 + -0.2
71,585 - -0.2
71,594 + -0.3
71,604 + -0.3
71,604 - 0.4
71,634 + -0.3
71,634 - 0.4
71,636 + -3.0
71,640 - 0.4
71,678 - 0.1
71,699 + -0.3
71,706 + -0.3
71,727 - 0.5
71,727 - 1.4
71,731 + 0.2
71,731 + 0.7
71,732 + -0.2
71,735 + 0.8
71,736 + -1.0
71,740 + -0.4
71,741 - -0.6
71,744 + -0.2
71,745 + -0.5
71,751 + -0.5
71,751 - 0.5
71,752 - -2.3
71,757 - -0.2
71,762 - 0.2
71,764 + -0.9
71,771 - -0.2
71,774 - -0.1
71,775 - 0.9
71,776 + -0.3
71,782 - -0.7
71,783 - -0.7
71,789 + -0.5
71,790 - -1.1
71,793 + -0.1
71,797 - -0.3
71,797 + 0.3
71,797 + -3.1
71,798 + -0.7
71,803 - -0.9
71,804 - -0.1
71,805 + -0.7
71,829 + -0.0
71,837 - -0.9
71,837 + 0.8
71,849 + -0.8
71,852 + -0.7
71,853 - 0.0
71,862 + -0.6
71,862 + -0.6
71,863 - -1.8
71,865 + -2.8
71,866 + -1.2
71,868 + -0.2
71,868 + 1.0
71,869 - 0.2
71,877 - -0.2
71,962 - 0.1
71,965 - 0.2
71,990 - -0.1
71,995 + -1.6
72,003 + 0.3
72,006 + 0.1
72,012 - 1.3
72,013 - 0.4
72,014 - 0.3
72,028 + 0.4
72,035 - -0.2
72,146 - 1.3
72,146 - -0.4
72,146 - -0.4
72,150 - 0.2
72,163 + 0.4