Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5133

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5132: 13500 - K03025 RPC6, POLR3F DNA-directed RNA polymerase III subunit RPC6, at 1833985 to 1836173 13500 mRNA_5133: 13501 - Interpro Proteasome assembly chaperone 4, at 1836292 to 1836837 13501 mRNA_5134: 13502 - Hypothetical Protein, at 1837309 to 1837612 13502

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,835,852 - 13500 mRNA_5132 0.85 -2.7
1,835,954 + 13500 mRNA_5132 0.90 -0.1
1,836,240 - 0.3
1,836,257 - 0.3
1,836,411 - 13501 mRNA_5133 0.22 0.6
1,836,411 - 13501 mRNA_5133 0.22 1.1
1,836,537 + 13501 mRNA_5133 0.45 0.6
1,836,552 - 13501 mRNA_5133 0.48 0.9
1,836,654 - 13501 mRNA_5133 0.66 1.4
1,836,657 - 13501 mRNA_5133 0.67 1.0
1,836,860 + -0.2
1,837,125 + 0.0
1,837,235 + -0.9
1,837,326 + -2.3
1,837,431 - 13502 mRNA_5134 0.40 1.1
1,837,453 + 13502 mRNA_5134 0.47 -0.1
1,837,463 - 13502 mRNA_5134 0.51 0.0
1,837,572 - 13502 mRNA_5134 0.87 0.5
1,837,639 - 0.1
1,837,728 - 0.1
1,837,748 - -0.3
1,837,774 + -0.0
1,837,780 - 0.3
1,837,794 + -0.1
1,837,794 + 0.5
1,837,817 - 0.0
1,837,818 - 0.2
1,837,823 + -0.2
1,837,823 - -0.0
1,837,824 - 0.0
1,837,824 + -1.1
1,837,824 - 0.7
1,837,825 - 1.9
1,837,826 - 0.3
1,837,830 + -0.1
1,837,836 - -1.1
1,837,837 - 0.1