Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5131

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5130: 13498 - Hypothetical Protein, at 1829263 to 1829910 13498 mRNA_5131: 13499 - Hypothetical Protein, at 1830077 to 1833638 13499 mRNA_5132: 13500 - K03025 RPC6, POLR3F DNA-directed RNA polymerase III subunit RPC6, at 1833985 to 1836173 13500

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,829,136 + -0.1
1,829,249 + -0.3
1,829,696 + 13498 mRNA_5130 0.67 -1.4
1,829,953 + 1.2
1,829,966 + -0.9
1,830,093 - 0.2
1,830,267 - -0.6
1,830,597 - 13499 mRNA_5131 0.15 -1.6
1,830,597 - 13499 mRNA_5131 0.15 1.4
1,830,680 - 13499 mRNA_5131 0.17 0.0
1,831,406 - 13499 mRNA_5131 0.37 1.9
1,831,553 - 13499 mRNA_5131 0.41 -0.5
1,831,945 + 13499 mRNA_5131 0.52 -0.3
1,832,125 + 13499 mRNA_5131 0.57 0.4
1,832,316 - 13499 mRNA_5131 0.63 0.4
1,832,455 - 13499 mRNA_5131 0.67 0.1
1,832,747 + 13499 mRNA_5131 0.75 -0.7
1,832,904 - 13499 mRNA_5131 0.79 0.4
1,832,956 + 13499 mRNA_5131 0.81 -0.3
1,833,062 + 13499 mRNA_5131 0.84 0.3
1,833,064 + 13499 mRNA_5131 0.84 -0.3
1,833,204 + 13499 mRNA_5131 0.88 -1.2
1,833,216 - 13499 mRNA_5131 0.88 -1.9
1,833,221 - 13499 mRNA_5131 0.88 -1.8
1,833,235 - 13499 mRNA_5131 0.89 0.9
1,833,329 - 0.5
1,833,341 - -0.6
1,833,350 - 0.0
1,833,352 - 0.3
1,833,371 - -1.4
1,833,371 - 0.8
1,833,383 - 1.2
1,833,394 - 1.4
1,833,397 + -1.1
1,833,398 + 0.2
1,833,398 - -0.8
1,833,413 - 0.2
1,833,415 + -0.2
1,833,421 + -1.3
1,833,423 + -0.1
1,833,426 + -0.5
1,833,430 + -0.7
1,833,450 - -1.7
1,833,487 - 0.6
1,833,487 - -0.0
1,833,488 - -1.3
1,833,495 + -1.8
1,833,498 + -1.8
1,833,500 + 0.4
1,833,503 - -0.2
1,833,508 - -0.0
1,833,514 + 0.1
1,833,531 + -0.0
1,833,563 - -0.1
1,833,564 + 0.5
1,833,570 - -0.3
1,833,572 + 0.6
1,833,573 - -0.3
1,833,576 - 0.3
1,833,576 - 0.5
1,833,578 + -0.1
1,833,581 - -2.1
1,833,581 + -0.3
1,833,583 - 1.1
1,833,587 - -0.1
1,833,591 - -0.4
1,833,603 + 0.1
1,833,605 + -0.1
1,833,605 - -0.4
1,833,606 + -0.0
1,833,618 + 1.7
1,833,620 + -2.6
1,833,627 - -0.4
1,833,627 - 0.8
1,833,649 + 0.3
1,833,653 + -0.5
1,833,661 - 0.0
1,833,661 - 0.3
1,833,663 + -0.1
1,833,663 + 0.3
1,833,663 - 0.9
1,833,664 - -1.3
1,833,666 + 0.9
1,833,671 + 1.5
1,833,700 - -0.6
1,833,721 - -0.1
1,833,721 + 1.5
1,833,731 + 0.1
1,833,733 - 0.3
1,833,739 - 0.8
1,833,741 + 0.2
1,833,748 + 1.5
1,833,750 - -0.1
1,833,753 - 0.9
1,833,753 - 0.5
1,833,754 - -0.4
1,833,762 + 0.2
1,833,769 - -0.4
1,833,770 - 2.4
1,833,772 + -1.2
1,833,776 + -1.5
1,833,777 + -0.1
1,833,781 + -0.4
1,833,781 + -0.2
1,833,789 - -0.3
1,833,792 + -0.9
1,833,792 + -1.5
1,833,794 - 0.0
1,833,794 + 1.2
1,833,800 - 0.2
1,833,801 - -0.4
1,833,802 + 1.0
1,833,809 + 0.6
1,833,931 + -0.1
1,833,938 - -0.5
1,833,947 - 0.2
1,834,208 - 13500 mRNA_5132 0.10 1.0