Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5107

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5106: 13474 - K12819 SLU7 pre-mRNA-processing factor SLU7, at 1769315 to 1772134 13474 mRNA_5107: 13475 - K03130 TAF5 transcription initiation factor TFIID subunit 5, at 1772311 to 1779712 13475 mRNA_5108: 13476 - BLAST V175_0103_1006-like protein [Amanita sp. 'sp-jack1'], at 1779860 to 1781501 13476

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,772,190 + -1.5
1,773,771 - 13475 mRNA_5107 0.20 0.2
1,775,588 - 13475 mRNA_5107 0.44 -1.4
1,775,618 + 13475 mRNA_5107 0.45 -2.4
1,775,620 - 13475 mRNA_5107 0.45 0.1
1,775,640 + 13475 mRNA_5107 0.45 0.7
1,775,654 + 13475 mRNA_5107 0.45 0.4
1,775,660 + 13475 mRNA_5107 0.45 0.7
1,775,660 + 13475 mRNA_5107 0.45 -0.9
1,775,661 + 13475 mRNA_5107 0.45 -0.3
1,775,662 - 13475 mRNA_5107 0.45 0.1
1,775,662 - 13475 mRNA_5107 0.45 -0.6
1,775,694 - 13475 mRNA_5107 0.46 0.1
1,775,699 + 13475 mRNA_5107 0.46 -1.6
1,775,791 - 13475 mRNA_5107 0.47 -1.5
1,775,801 - 13475 mRNA_5107 0.47 0.1
1,775,806 - 13475 mRNA_5107 0.47 1.4
1,775,815 - 13475 mRNA_5107 0.47 -0.6
1,775,816 + 13475 mRNA_5107 0.47 -0.4
1,775,824 - 13475 mRNA_5107 0.47 -2.4
1,775,824 - 13475 mRNA_5107 0.47 0.2
1,775,824 - 13475 mRNA_5107 0.47 -1.4
1,775,827 + 13475 mRNA_5107 0.48 0.2
1,775,835 + 13475 mRNA_5107 0.48 -1.6
1,775,839 + 13475 mRNA_5107 0.48 0.3
1,775,845 + 13475 mRNA_5107 0.48 -0.0
1,775,845 + 13475 mRNA_5107 0.48 -0.7
1,775,846 + 13475 mRNA_5107 0.48 0.6
1,775,854 + 13475 mRNA_5107 0.48 -0.5
1,775,856 + 13475 mRNA_5107 0.48 0.2
1,775,874 + 13475 mRNA_5107 0.48 -1.2
1,775,874 + 13475 mRNA_5107 0.48 -0.7
1,775,880 - 13475 mRNA_5107 0.48 0.3
1,775,881 + 13475 mRNA_5107 0.48 -0.7
1,775,881 + 13475 mRNA_5107 0.48 -0.6
1,775,881 + 13475 mRNA_5107 0.48 0.3
1,775,882 - 13475 mRNA_5107 0.48 -1.0
1,775,884 + 13475 mRNA_5107 0.48 0.2
1,775,890 + 13475 mRNA_5107 0.48 -0.4
1,775,892 - 13475 mRNA_5107 0.48 -2.6
1,775,893 - 13475 mRNA_5107 0.48 1.1
1,775,894 - 13475 mRNA_5107 0.48 -0.9
1,775,899 + 13475 mRNA_5107 0.48 -1.0
1,775,915 - 13475 mRNA_5107 0.49 -0.4
1,775,916 + 13475 mRNA_5107 0.49 0.0
1,775,916 - 13475 mRNA_5107 0.49 0.8
1,775,917 - 13475 mRNA_5107 0.49 -0.5
1,775,918 - 13475 mRNA_5107 0.49 -0.1
1,775,923 + 13475 mRNA_5107 0.49 -0.5
1,775,925 - 13475 mRNA_5107 0.49 -0.5
1,775,925 + 13475 mRNA_5107 0.49 -0.9
1,775,931 + 13475 mRNA_5107 0.49 -1.2
1,775,937 + 13475 mRNA_5107 0.49 -1.6
1,775,945 - 13475 mRNA_5107 0.49 0.7
1,776,072 + 13475 mRNA_5107 0.51 0.3
1,776,093 + 13475 mRNA_5107 0.51 -0.4
1,776,095 + 13475 mRNA_5107 0.51 -1.5
1,776,097 - 13475 mRNA_5107 0.51 -0.6
1,776,201 - 13475 mRNA_5107 0.53 0.4
1,776,233 - 13475 mRNA_5107 0.53 -0.4
1,776,238 - 13475 mRNA_5107 0.53 -2.0
1,776,301 - 13475 mRNA_5107 0.54 -0.3
1,776,382 + 13475 mRNA_5107 0.55 -0.8
1,776,668 - 13475 mRNA_5107 0.59 -0.5
1,776,710 + 13475 mRNA_5107 0.59 -2.3
1,776,711 + 13475 mRNA_5107 0.59 -2.3
1,776,837 + 13475 mRNA_5107 0.61 -2.0
1,776,873 + 13475 mRNA_5107 0.62 -2.1
1,776,940 + 13475 mRNA_5107 0.63 -2.5
1,777,117 + 13475 mRNA_5107 0.65 -1.9
1,777,276 - 13475 mRNA_5107 0.67 -0.7
1,777,284 - 13475 mRNA_5107 0.67 -0.4
1,777,860 - 13475 mRNA_5107 0.75 -1.1
1,778,091 - 13475 mRNA_5107 0.78 -1.7
1,778,107 + 13475 mRNA_5107 0.78 -2.7
1,778,128 - 13475 mRNA_5107 0.79 -2.0
1,778,295 + 13475 mRNA_5107 0.81 -3.2
1,778,459 + 13475 mRNA_5107 0.83 -2.8
1,778,681 - 13475 mRNA_5107 0.86 -0.7
1,778,841 + 13475 mRNA_5107 0.88 -2.3
1,779,422 - -1.3
1,779,591 + 0.9
1,780,159 - 13476 mRNA_5108 0.18 -0.5
1,780,160 - 13476 mRNA_5108 0.18 -0.6
1,780,456 - 13476 mRNA_5108 0.36 -0.7
1,780,598 + 13476 mRNA_5108 0.45 -0.8