Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5102

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5101: 13469 - K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma, at 1751358 to 1752700 13469 mRNA_5102: 13470 - KOG0619 FOG Leucine rich repeat, at 1753629 to 1757881 13470 mRNA_5103: 13471 - K03099 SOS son of sevenless, at 1758671 to 1763554 13471

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,753,066 + 0.1
1,753,066 - 1.4
1,753,099 + -0.1
1,753,226 + 0.6
1,753,239 + -0.9
1,753,369 - -0.1
1,753,373 + 0.2
1,753,397 + -0.7
1,753,403 + -0.2
1,753,412 + 0.2
1,753,503 - 0.2
1,753,815 - -0.0
1,753,935 - -1.2
1,754,085 - 13470 mRNA_5102 0.11 0.4
1,754,092 + 13470 mRNA_5102 0.11 -0.2
1,754,122 - 13470 mRNA_5102 0.12 -1.8
1,754,228 - 13470 mRNA_5102 0.14 0.2
1,754,241 - 13470 mRNA_5102 0.14 -0.4
1,754,263 - 13470 mRNA_5102 0.15 2.6
1,754,272 + 13470 mRNA_5102 0.15 0.3
1,754,690 - 13470 mRNA_5102 0.25 0.4
1,755,159 + 13470 mRNA_5102 0.36 0.1
1,755,259 - 13470 mRNA_5102 0.38 0.2
1,755,483 - 13470 mRNA_5102 0.44 -3.1
1,755,541 + 13470 mRNA_5102 0.45 2.5
1,755,550 - 13470 mRNA_5102 0.45 2.0
1,755,553 + 13470 mRNA_5102 0.45 1.4
1,755,573 - 13470 mRNA_5102 0.46 1.8
1,755,589 + 13470 mRNA_5102 0.46 1.8
1,755,855 - 13470 mRNA_5102 0.52 1.5
1,755,882 + 13470 mRNA_5102 0.53 -0.6
1,755,976 - 13470 mRNA_5102 0.55 1.0
1,756,272 - 13470 mRNA_5102 0.62 1.2
1,756,745 - 13470 mRNA_5102 0.73 1.1
1,756,761 - 13470 mRNA_5102 0.74 -1.3
1,756,906 + 13470 mRNA_5102 0.77 0.0
1,757,036 - 13470 mRNA_5102 0.80 -0.3
1,757,036 + 13470 mRNA_5102 0.80 0.5
1,757,194 + 13470 mRNA_5102 0.84 0.6
1,757,201 - 13470 mRNA_5102 0.84 1.0
1,757,306 + 13470 mRNA_5102 0.86 1.2
1,757,312 - 13470 mRNA_5102 0.87 0.7
1,757,330 - 13470 mRNA_5102 0.87 1.5
1,757,341 - 13470 mRNA_5102 0.87 1.2
1,757,454 - 13470 mRNA_5102 0.90 1.7
1,757,457 + 1.8
1,757,477 + 1.4
1,757,648 - 0.5
1,757,745 - 1.2
1,757,896 + 1.7
1,757,899 - 0.2
1,757,921 - -2.3
1,758,022 - -1.1
1,758,343 + -0.3
1,758,355 - -0.3
1,758,358 + 1.3
1,758,362 - -0.3
1,758,483 + -1.5
1,758,500 - 1.8
1,758,625 - -0.9
1,758,627 + -1.7
1,758,639 + -2.1
1,758,787 - -0.8
1,758,815 + -0.7