Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5077

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5076: 13444 - K00588 E2.1.1.104 caffeoyl-CoA O-methyltransferase, at 1690451 to 1691745 13444 mRNA_5077: 13445 - KOG1663 O-methyltransferase, at 1692035 to 1693349 13445 mRNA_5078: 13446 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1694035 to 1697967 13446

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,691,046 + 13444 mRNA_5076 0.46 0.2
1,691,265 - 13444 mRNA_5076 0.63 0.7
1,691,364 + 13444 mRNA_5076 0.71 -0.8
1,691,365 + 13444 mRNA_5076 0.71 -1.9
1,691,634 + -0.1
1,691,678 + -0.2
1,692,802 + 13445 mRNA_5077 0.58 -0.5
1,692,856 + 13445 mRNA_5077 0.62 -0.9
1,693,105 - 13445 mRNA_5077 0.81 -1.7
1,693,261 + 0.0
1,693,383 - 0.5
1,693,389 - -0.4
1,693,396 - -1.2
1,693,410 + -2.4
1,693,413 - 1.0
1,693,414 - -0.1
1,693,424 + -0.6
1,693,433 + -0.6
1,693,442 + -0.2
1,693,558 - 0.9
1,693,567 - 1.3
1,693,691 - 0.2
1,693,692 + 0.7
1,693,710 + -0.4
1,693,741 - 0.2
1,693,874 + -0.6