Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4984

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4983: 13351 - SUPERFAMILY--SSF48371, at 1473284 to 1476238 13351 mRNA_4984: 13352 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784, at 1476412 to 1477119 13352 mRNA_4985: 13353 - BLAST vps9 domain protein [Zymoseptoria brevis], at 1477424 to 1478250 13353

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,475,414 - 13351 mRNA_4983 0.72 -0.8
1,475,419 + 13351 mRNA_4983 0.72 0.0
1,475,850 - 13351 mRNA_4983 0.87 0.1
1,476,414 + -0.1
1,476,442 + -0.8
1,476,782 + 13352 mRNA_4984 0.52 0.1
1,477,001 + 13352 mRNA_4984 0.83 -1.7
1,477,033 + 13352 mRNA_4984 0.88 -1.8
1,477,123 - 0.4
1,477,134 - 0.2
1,477,135 - 0.3
1,477,135 - 1.0
1,477,143 + 0.8
1,477,143 - -0.0
1,477,167 + 0.2
1,477,167 - -0.9
1,477,177 - 0.8
1,477,196 + -0.9
1,477,255 - -0.5
1,477,337 - 1.7
1,477,351 + -1.3
1,477,356 + 1.2
1,477,471 - -0.6
1,477,494 + -0.2
1,477,625 - 13353 mRNA_4985 0.24 -1.5
1,478,095 - 13353 mRNA_4985 0.81 -0.8