Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4963

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4962: 13330 - Hypothetical Protein, at 1416081 to 1416742 13330 mRNA_4963: 13331 - Hypothetical Protein, at 1417369 to 1418489 13331 mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1419421 to 1420996 13332

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,416,394 + 13330 mRNA_4962 0.47 0.6
1,416,409 + 13330 mRNA_4962 0.50 0.6
1,416,539 + 13330 mRNA_4962 0.69 0.9
1,416,627 - 13330 mRNA_4962 0.82 0.4
1,416,686 + -0.6
1,416,788 + -0.4
1,416,897 + 0.7
1,416,900 - -0.2
1,416,951 + 0.4
1,417,063 - 0.6
1,417,213 + -0.4
1,417,266 - -0.5
1,417,529 - 13331 mRNA_4963 0.14 0.0
1,417,539 + 13331 mRNA_4963 0.15 -0.7
1,417,654 - 13331 mRNA_4963 0.25 -0.7
1,417,811 + 13331 mRNA_4963 0.39 0.4
1,417,823 - 13331 mRNA_4963 0.40 -0.6
1,417,852 + 13331 mRNA_4963 0.43 -1.1
1,417,920 + 13331 mRNA_4963 0.49 -0.8
1,417,974 + 13331 mRNA_4963 0.54 -0.6
1,418,236 - 13331 mRNA_4963 0.77 -0.1
1,418,327 + 13331 mRNA_4963 0.85 -0.3
1,418,356 + 13331 mRNA_4963 0.88 0.4
1,418,432 + -0.3
1,418,577 + -1.3
1,418,693 + 1.1
1,418,713 - -2.1
1,418,953 - -0.9
1,419,035 + 0.4
1,419,190 + 0.2
1,419,264 - -0.8
1,419,293 + 1.2