Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4721

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851220 to 854422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854 13090

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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853,825 + 13088 mRNA_4720 0.81 0.3
853,869 - 13088 mRNA_4720 0.83 -0.5
854,104 + -0.4
854,122 + -1.0
854,250 + 0.2
854,365 + 1.4
854,407 - -1.7
854,410 + -0.5
854,415 - 0.5
854,420 + 0.2
854,528 + 2.1
854,587 - -0.3
854,589 - -0.4
854,593 - -1.4
854,610 + 0.4
854,664 + -1.7
854,743 + -0.2
854,753 - -0.3
854,756 + -0.7
854,884 - 0.8
856,535 + 13089 mRNA_4721 0.54 1.7
857,781 + 0.9
858,337 + 0.7
858,513 - -0.4
858,848 + 13090 mRNA_4722 0.17 0.4
858,979 - 13090 mRNA_4722 0.22 0.2
858,990 + 13090 mRNA_4722 0.22 1.0
859,010 - 13090 mRNA_4722 0.23 -0.5