Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4609

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4608: 12976 - KOG0254 Predicted transporter (major facilitator superfamily), at 572565 to 575380 12976 mRNA_4609: 12977 - K00008 SORD, gutB L-iditol 2-dehydrogenase, at 575731 to 577281 12977

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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574,840 - 12976 mRNA_4608 0.81 1.2
575,011 + 12976 mRNA_4608 0.87 -0.2
575,174 - 0.5
575,193 + -0.5
575,483 - 0.3
575,504 - 0.4
575,510 - -0.5
575,511 + -0.1
575,516 - 0.7
575,519 - -0.0
575,520 - -0.6
575,521 + -0.4
575,538 - -0.4
575,553 - -0.3
575,559 + -0.1
575,562 - 0.3
575,611 - -0.2
575,613 + -0.3
575,616 + -0.1
575,617 - -0.2
575,629 + 0.0
575,636 - -0.2
575,640 - 0.1
575,643 + -0.5
575,643 + 0.9
575,646 - 1.2
575,651 + -1.2
575,656 + -2.0
575,657 + 0.4
575,666 + -0.4
575,687 - -0.2
575,689 + -0.2
575,753 - -0.2
575,908 + 12977 mRNA_4609 0.11 -0.5
575,912 + 12977 mRNA_4609 0.12 -1.7
575,915 - 12977 mRNA_4609 0.12 0.7
575,922 - 12977 mRNA_4609 0.12 0.4
575,941 - 12977 mRNA_4609 0.14 -0.3
575,948 + 12977 mRNA_4609 0.14 0.1
576,952 - 12977 mRNA_4609 0.79 0.4
576,963 + 12977 mRNA_4609 0.79 0.7
577,511 - 0.2
577,693 - -1.6
577,696 + -0.3
578,122 - -0.2
578,248 - -0.5
578,260 + -0.4
578,264 + -0.9
578,270 + -0.7
578,272 + -0.3
578,277 + -2.6
578,280 - 0.2