Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4540

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4539: 12907 - HMMPfam-DNA polymerase subunit Cdc27-PF09507, at 410744 to 412303 12907 mRNA_4540: 12908 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 412485 to 416287 12908 mRNA_4541: 12909 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 417161 to 419747 12909

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
411,827 + 12907 mRNA_4539 0.69 1.5
412,174 + -0.7
412,749 + -0.9
414,317 + 12908 mRNA_4540 0.48 -0.1
414,351 - 12908 mRNA_4540 0.49 -0.4
414,789 - 12908 mRNA_4540 0.61 -0.1
414,949 + 12908 mRNA_4540 0.65 0.5
415,108 - 12908 mRNA_4540 0.69 0.1
415,235 + 12908 mRNA_4540 0.72 0.4
415,677 - 12908 mRNA_4540 0.84 0.0
415,704 + 12908 mRNA_4540 0.85 -0.1
415,813 - 12908 mRNA_4540 0.88 -0.1
415,826 - 12908 mRNA_4540 0.88 -1.1
415,938 + 1.6
416,111 - -0.5
416,246 - 0.1
416,272 - 0.8
416,273 + 0.5
416,284 + -0.1
416,394 - -0.0
416,420 + 1.0
416,428 + -0.3
416,548 - 0.5
416,572 - 1.1
416,733 - 0.7
416,756 - -0.7
416,859 - 1.1
416,868 - 0.6
416,877 + -1.3
416,910 - -0.6
416,914 - 0.2
416,915 + -0.9
416,916 + -0.0