Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4536

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4535: 12903 - Hypothetical Protein, at 402768 to 403548 12903 mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404129 to 405942 12904 mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406318 to 409422 12905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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403,334 + 12903 mRNA_4535 0.72 -1.0
403,442 - 12903 mRNA_4535 0.86 -2.1
404,314 + 12904 mRNA_4536 0.10 -1.0
404,463 + 12904 mRNA_4536 0.18 1.1
405,161 - 12904 mRNA_4536 0.57 -0.1
405,313 + 12904 mRNA_4536 0.65 -0.3
405,396 + 12904 mRNA_4536 0.70 0.3
405,893 + 0.5
405,898 - -0.3
405,907 + 0.1
406,069 + 0.3
406,200 + -1.3
406,200 + -0.1
406,350 + -0.5
406,800 + 12905 mRNA_4537 0.16 0.1