Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4320

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4319: 12687 - Hypothetical Protein, at 1894697 to 1895182 12687 mRNA_4320: 12688 - K03255 TIF31, CLU1 protein TIF31, at 1895347 to 1900311 12688 mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1900603 to 1903265 12689

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,894,463 - -0.0
1,894,489 - -0.5
1,894,554 - -0.5
1,894,560 - -1.5
1,894,562 - 0.0
1,894,563 + -0.0
1,894,572 + 0.1
1,894,676 + 0.2
1,894,728 - 0.1
1,894,737 + -1.4
1,894,970 + 12687 mRNA_4319 0.56 -0.1
1,895,011 + 12687 mRNA_4319 0.65 0.0
1,895,022 - 12687 mRNA_4319 0.67 -0.7
1,895,043 - 12687 mRNA_4319 0.71 0.0
1,895,045 + 12687 mRNA_4319 0.72 -0.0
1,895,297 - 0.2
1,895,359 + -0.7
1,895,582 + -1.5
1,896,037 - 12688 mRNA_4320 0.14 1.0
1,896,070 + 12688 mRNA_4320 0.15 0.6
1,896,293 - 12688 mRNA_4320 0.19 -1.1
1,896,349 - 12688 mRNA_4320 0.20 0.4
1,896,544 - 12688 mRNA_4320 0.24 0.4
1,896,565 - 12688 mRNA_4320 0.25 -0.9
1,897,171 - 12688 mRNA_4320 0.37 0.5
1,897,787 + 12688 mRNA_4320 0.49 -0.2
1,897,997 - 12688 mRNA_4320 0.53 -0.7
1,898,355 + 12688 mRNA_4320 0.61 -0.1
1,898,358 + 12688 mRNA_4320 0.61 0.2
1,898,361 - 12688 mRNA_4320 0.61 0.6
1,899,514 + 12688 mRNA_4320 0.84 -1.2
1,899,515 + 12688 mRNA_4320 0.84 0.1
1,899,653 - 12688 mRNA_4320 0.87 -0.0
1,899,667 + 12688 mRNA_4320 0.87 0.2
1,899,675 + 12688 mRNA_4320 0.87 0.1
1,899,773 - 12688 mRNA_4320 0.89 -1.1
1,899,784 - 12688 mRNA_4320 0.89 -3.4
1,899,821 + -1.2
1,899,959 + -0.6
1,900,262 + -1.9
1,900,394 + -2.3
1,900,397 + 0.5
1,900,412 + -1.6
1,900,420 - 0.4
1,900,427 + 0.6
1,900,437 + 0.5
1,901,274 + 12689 mRNA_4321 0.25 1.4