Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4291

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4290: 12658 - Hypothetical Protein, at 1814315 to 1814636 12658 mRNA_4291: 12659 - Hypothetical Protein, at 1815371 to 1816823 12659 mRNA_4292: 12660 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1817819 to 1819208 12660

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,814,457 + 12658 mRNA_4290 0.44 0.2
1,814,726 - -0.7
1,814,741 + 0.3
1,814,850 - 0.1
1,814,887 + -1.1
1,814,917 + 0.7
1,815,019 + -0.1
1,815,177 - 0.7
1,815,188 - 0.1
1,815,195 + -0.5
1,815,196 - -0.1
1,815,196 - 0.5
1,815,368 - -0.0
1,815,369 + 0.6
1,815,762 + 12659 mRNA_4291 0.27 -0.3
1,816,045 - 12659 mRNA_4291 0.46 0.7
1,816,078 - 12659 mRNA_4291 0.49 1.1
1,816,213 - 12659 mRNA_4291 0.58 -0.5
1,816,396 + 12659 mRNA_4291 0.71 -1.0
1,816,545 + 12659 mRNA_4291 0.81 0.3
1,816,805 + -1.4
1,816,817 + 0.6
1,816,947 + 0.1
1,816,965 + -1.6
1,816,980 + -1.2
1,817,085 - -0.1
1,817,107 - 0.6
1,817,125 - -1.1
1,817,135 - -0.9
1,817,244 - -0.5
1,817,245 + -0.1
1,817,269 - -1.4
1,817,285 + 0.0
1,817,290 + -0.7
1,817,419 + -1.0
1,817,419 + 0.3
1,817,431 + 0.2
1,817,440 + -0.3
1,817,441 - 0.1
1,817,447 + 0.7
1,817,455 - 0.3
1,817,457 + -0.2
1,817,460 + 0.5
1,817,541 - 1.3
1,817,560 + 0.4
1,817,566 + -0.1
1,817,596 + -0.3
1,817,620 + -0.4
1,817,623 - -1.4
1,817,728 - 1.6