Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4255

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1719227 to 1720870 12622 mRNA_4255: 12623 - HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482, at 1721312 to 1723112 12623 mRNA_4256: 12624 - HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474, at 1723590 to 1725479 12624

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,720,629 - 12622 mRNA_4254 0.85 -1.2
1,721,182 - -1.4
1,721,185 + 0.4
1,721,193 - -0.5
1,721,200 - -1.1
1,721,204 + 0.3
1,721,206 + -0.1
1,721,214 + -0.3
1,721,255 + 0.6
1,721,404 + 0.8
1,721,404 + -0.5
1,722,012 - 12623 mRNA_4255 0.39 0.1
1,722,016 - 12623 mRNA_4255 0.39 0.2
1,722,116 - 12623 mRNA_4255 0.45 1.3
1,722,404 - 12623 mRNA_4255 0.61 0.2
1,722,431 + 12623 mRNA_4255 0.62 -0.2
1,722,446 + 12623 mRNA_4255 0.63 -0.3
1,722,840 - 12623 mRNA_4255 0.85 -0.2
1,722,852 - 12623 mRNA_4255 0.86 -1.1
1,722,876 - 12623 mRNA_4255 0.87 -1.1
1,723,052 + -0.5
1,723,129 + -1.8
1,723,309 - 0.1
1,723,313 - -0.0
1,723,319 + 0.9
1,723,434 - -1.0
1,723,452 + 0.4
1,723,457 + -0.1
1,723,464 - -0.0
1,723,474 - -0.4
1,723,474 + -2.4
1,723,481 + 1.0
1,723,732 - 0.5
1,723,734 - 0.3
1,723,741 + 0.1
1,723,746 - -0.5
1,723,750 - -0.9
1,723,771 + -0.3
1,724,021 - 12624 mRNA_4256 0.23 0.1
1,724,039 + 12624 mRNA_4256 0.24 -0.3