Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4142

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4141: 12509 - Hypothetical Protein, at 1452716 to 1454075 12509 mRNA_4142: 12510 - Hypothetical Protein, at 1454343 to 1455986 12510 mRNA_4143: 12511 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,HMMPfam-Acetyltransferase (GNAT) domain-PF13444,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 1456221 to 1457720 12511

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
1,453,817 - 12509 mRNA_4141 0.81 -1.1
1,454,097 - 1.0
1,454,161 - -1.1
1,454,163 - -0.6
1,454,184 - -2.7
1,454,302 + 0.5
1,454,347 + 0.4
1,454,356 + 0.6
1,454,361 + -0.4
1,454,467 + 0.7
1,454,481 - -0.3
1,454,595 - 12510 mRNA_4142 0.15 -1.7
1,454,613 + 12510 mRNA_4142 0.16 -0.8
1,454,626 + 12510 mRNA_4142 0.17 -0.7
1,454,634 + 12510 mRNA_4142 0.18 0.1
1,454,746 + 12510 mRNA_4142 0.25 0.1
1,454,764 - 12510 mRNA_4142 0.26 1.1
1,454,917 - 12510 mRNA_4142 0.35 0.6
1,455,042 - 12510 mRNA_4142 0.43 0.6
1,455,057 + 12510 mRNA_4142 0.43 -0.2
1,455,066 - 12510 mRNA_4142 0.44 0.7
1,455,071 + 12510 mRNA_4142 0.44 -0.7
1,455,075 + 12510 mRNA_4142 0.45 0.2
1,455,077 + 12510 mRNA_4142 0.45 -0.1
1,455,388 - 12510 mRNA_4142 0.64 0.1
1,455,810 - 12510 mRNA_4142 0.89 0.3
1,455,954 + 0.2
1,456,067 - 0.4
1,456,085 - 0.6
1,456,089 - -0.4
1,456,100 + 0.6
1,456,117 - -2.2
1,456,261 - -0.9
1,456,262 + -0.3
1,456,679 - 12511 mRNA_4143 0.31 1.7
1,456,688 + 12511 mRNA_4143 0.31 -0.5
1,456,712 + 12511 mRNA_4143 0.33 0.4