Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4005

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1126968 to 1131164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1131746 to 1132749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1133171 to 1133679 12374

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,131,095 + -0.6
1,131,352 - 0.1
1,131,928 + 12373 mRNA_4005 0.18 1.2
1,133,054 + -1.5
1,133,294 - 12374 mRNA_4006 0.24 0.1