Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3970

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3969: 12337 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 1025605 to 1026362 12337 mRNA_3970: 12338 - Hypothetical Protein, at 1026550 to 1027191 12338 mRNA_3971: 12339 - K02964 RP-S18e, RPS18 small subunit ribosomal protein S18e, at 1027853 to 1028767 12339

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,025,936 + 12337 mRNA_3969 0.44 1.2
1,025,954 - 12337 mRNA_3969 0.46 -1.7
1,026,107 + 12337 mRNA_3969 0.66 0.3
1,026,436 + 0.4
1,026,931 - 12338 mRNA_3970 0.59 -0.8
1,026,931 + 12338 mRNA_3970 0.59 0.2
1,026,953 + 12338 mRNA_3970 0.63 -0.9
1,027,077 - 12338 mRNA_3970 0.82 -0.0
1,027,231 - -0.1
1,027,242 - -1.2
1,027,258 - 0.9