Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3901

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3900: 12268 - SUPERFAMILY--SSF55729, at 850598 to 851508 12268 mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852096 to 854470 12269 mRNA_3902: 12270 - K12471 EPN epsin, at 855134 to 857273 12270

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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851,382 + 12268 mRNA_3900 0.86 -1.2
851,620 - 1.0
851,865 + 0.3
851,873 - -0.9
851,927 - 0.0
852,069 + -0.5
852,171 - -2.1
852,639 + 12269 mRNA_3901 0.23 -0.5
853,339 - 12269 mRNA_3901 0.52 -0.4
853,389 + 12269 mRNA_3901 0.54 -0.5
853,635 - 12269 mRNA_3901 0.65 -0.4
853,661 - 12269 mRNA_3901 0.66 0.2
853,779 - 12269 mRNA_3901 0.71 0.9
853,906 + 12269 mRNA_3901 0.76 -0.4
854,074 - 12269 mRNA_3901 0.83 -0.2
854,091 - 12269 mRNA_3901 0.84 -0.8
854,324 + -2.1
854,389 + 0.4
854,496 - 0.4
854,501 + 0.1
854,512 - -0.3
854,516 - 0.1
854,519 + 0.3
854,526 - 0.5
854,527 + 1.6
854,531 + 0.2
854,663 + -1.7
854,663 - 0.1
854,665 - 0.7
854,665 - -0.6
854,667 - 0.2
854,668 + -1.2
854,668 + -0.3
854,670 + -0.7
854,675 - -1.9
854,675 + -0.8
854,675 - -1.8
854,676 + -1.1
854,676 + 0.1
854,677 + -1.2
854,679 + 0.8
854,692 - 0.1
854,695 - -0.5
854,743 - -2.4
854,762 + -0.2
854,765 - -0.2
854,770 - 0.6
854,775 + 0.4
854,786 + -2.0
854,891 - 0.3
854,908 + 0.0
854,916 + 0.1
854,925 - 1.6
854,927 - -0.4
855,054 - -0.5
855,071 + -0.6