Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3893

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3892: 12260 - Hypothetical Protein, at 837987 to 839368 12260 mRNA_3893: 12261 - K07375 TUBB tubulin beta, at 839639 to 842065 12261 mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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838,801 - 12260 mRNA_3892 0.59 1.8
838,911 - 12260 mRNA_3892 0.67 -0.0
838,921 + 12260 mRNA_3892 0.68 0.4
839,189 + 12260 mRNA_3892 0.87 -2.0
839,215 - 12260 mRNA_3892 0.89 0.3
839,218 + 12260 mRNA_3892 0.89 0.6
839,255 + 0.0
839,642 - -0.1
839,682 + -0.1
839,911 + 12261 mRNA_3893 0.11 -0.1
840,039 + 12261 mRNA_3893 0.16 -0.3
840,957 + 12261 mRNA_3893 0.54 0.8
840,970 - 12261 mRNA_3893 0.55 0.2
841,210 + 12261 mRNA_3893 0.65 -0.9
841,210 + 12261 mRNA_3893 0.65 0.3
841,268 + 12261 mRNA_3893 0.67 0.0
841,690 + 12261 mRNA_3893 0.85 -0.9
841,839 - -0.7
841,853 + -0.4
842,129 - -0.8
842,143 + 1.3
842,151 + -0.4
842,165 + -0.1
842,169 + -1.9
842,172 + -0.1
842,750 + 12262 mRNA_3894 0.27 0.0
842,769 + 12262 mRNA_3894 0.28 -0.1
842,850 + 12262 mRNA_3894 0.35 -1.1
842,899 + 12262 mRNA_3894 0.40 -1.7