Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3828

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3827: 12195 - Hypothetical Protein, at 676929 to 682172 12195 mRNA_3828: 12196 - Hypothetical Protein, at 682813 to 683280 12196 mRNA_3829: 12197 - KOG0519 Sensory transduction histidine kinase, at 684010 to 687695 12197

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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682,106 - 0.3
682,363 - 0.5
682,364 + 0.0
682,367 - -1.7
682,382 + -0.9
682,520 - 1.1
682,529 + 0.3
682,541 + 1.2
682,543 - 0.7
682,657 + 0.1
682,675 - -1.2
682,681 + 1.7
682,705 - 1.0
682,706 + 0.8
682,709 + 0.0
682,816 - 0.5
682,818 - -1.0
682,831 + -0.8
682,834 + -0.3
682,876 + 12196 mRNA_3828 0.13 -0.4
682,969 - 12196 mRNA_3828 0.33 0.7
682,969 - 12196 mRNA_3828 0.33 -0.4
683,108 - 12196 mRNA_3828 0.63 0.7
683,128 - 12196 mRNA_3828 0.67 -0.1
683,139 - 12196 mRNA_3828 0.70 -0.1
683,143 - 12196 mRNA_3828 0.71 -0.0
683,149 + 12196 mRNA_3828 0.72 1.9
683,152 - 12196 mRNA_3828 0.72 -0.8
683,156 + 12196 mRNA_3828 0.73 0.4
683,166 - 12196 mRNA_3828 0.75 0.2
683,166 - 12196 mRNA_3828 0.75 -0.1
683,167 - 12196 mRNA_3828 0.76 -0.3
683,168 + 12196 mRNA_3828 0.76 0.4
683,170 - 12196 mRNA_3828 0.76 -0.1
683,172 + 12196 mRNA_3828 0.77 -0.8
683,173 - 12196 mRNA_3828 0.77 0.2
683,174 + 12196 mRNA_3828 0.77 0.3
683,179 + 12196 mRNA_3828 0.78 -0.3
683,190 + 12196 mRNA_3828 0.81 0.1
683,196 - 12196 mRNA_3828 0.82 -0.7
683,201 + 12196 mRNA_3828 0.83 0.5
683,205 + 12196 mRNA_3828 0.84 -0.3
683,205 + 12196 mRNA_3828 0.84 -0.7
683,213 + 12196 mRNA_3828 0.85 -0.7
683,217 - 12196 mRNA_3828 0.86 0.8
683,218 + 12196 mRNA_3828 0.87 -0.4
683,219 - 12196 mRNA_3828 0.87 0.3
683,226 + 12196 mRNA_3828 0.88 -1.1
683,230 - 12196 mRNA_3828 0.89 -0.1
683,233 + 12196 mRNA_3828 0.90 0.6
683,236 + 0.1
683,264 + -0.3
683,268 + -0.6
683,331 - -3.0
683,366 - -1.1
683,366 + -1.3
683,367 - 0.5
683,376 - 0.3
683,379 - -0.1
683,380 - -0.1
683,383 + 0.5
683,385 - -0.5
683,402 - 0.2
683,409 - -0.4
683,410 + -0.9
683,410 - 0.7
683,410 - -0.4
683,411 - -1.3
683,414 + 1.0
683,417 - -0.0
683,418 + 0.2
683,419 - -0.4
683,421 - -0.3
683,423 + -0.6
683,438 - -1.1
683,444 - -0.2
683,448 - 0.2
683,461 + -0.4
683,463 - 0.2
683,465 + -0.3
683,467 - -1.2
683,469 - -1.2
683,475 - -0.8
683,476 - -0.7
683,478 + 0.6
683,480 - -0.5
683,485 + -0.0
683,504 + -0.4
683,507 - 0.2
683,508 + -0.2
683,510 + -1.6
683,511 - 0.0
683,515 + 0.6
683,525 + 0.7
683,600 - -0.5
683,626 - 0.6
683,638 + -0.3
683,692 + -1.2
683,792 + -0.5
683,792 + -0.8
683,794 + -0.1
683,797 - 1.9
683,802 - -0.5
683,813 + -0.5
683,821 - 0.1
683,824 - -0.6
683,950 + 0.6
684,110 - -1.3