Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3722

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3721: 12089 - K14544 UTP22, NOL6 U3 small nucleolar RNA-associated protein 22, at 428760 to 433033 12089 mRNA_3722: 12090 - K11251 H2A histone H2A, at 433464 to 434074 12090 mRNA_3723: 12091 - K11252 H2B histone H2B, at 434394 to 435035 12091

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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433,139 - -1.8
433,186 + -0.1
433,267 + 0.1
433,551 + 12090 mRNA_3722 0.14 -0.5
433,741 + 12090 mRNA_3722 0.45 0.5
433,869 + 12090 mRNA_3722 0.66 -0.2
433,880 - 12090 mRNA_3722 0.68 -0.5
434,155 - -1.2
434,169 - 0.4
434,173 + 0.1
434,178 + -0.7
434,180 + -0.2
434,182 - 1.4
434,183 + -0.9
434,239 - 1.0
434,244 + 0.1
434,289 + 0.5
434,297 + -0.4
434,303 - -0.3
434,316 + -0.1
434,321 - 0.8
434,322 - -0.3
434,336 - 0.2
434,438 - -1.0
434,444 - -0.7
434,452 + -1.3