Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3647

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3646: 12014 - Hypothetical Protein, at 249601 to 250328 12014 mRNA_3647: 12015 - Hypothetical Protein, at 250784 to 251947 12015 mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252546 to 253342 12016

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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249,786 - 12014 mRNA_3646 0.25 0.0
249,790 - 12014 mRNA_3646 0.26 -0.7
249,795 - 12014 mRNA_3646 0.27 -0.1
249,797 - 12014 mRNA_3646 0.27 -0.1
249,804 + 12014 mRNA_3646 0.28 0.1
249,806 + 12014 mRNA_3646 0.28 -0.6
249,816 - 12014 mRNA_3646 0.30 -0.5
249,822 - 12014 mRNA_3646 0.30 0.2
249,927 + 12014 mRNA_3646 0.45 -0.1
249,941 - 12014 mRNA_3646 0.47 -0.1
249,945 + 12014 mRNA_3646 0.47 -2.2
249,946 + 12014 mRNA_3646 0.47 -0.3
249,947 - 12014 mRNA_3646 0.48 -1.5
249,953 - 12014 mRNA_3646 0.48 0.1
249,954 - 12014 mRNA_3646 0.48 -1.6
249,955 + 12014 mRNA_3646 0.49 -0.9
249,963 + 12014 mRNA_3646 0.50 -1.4
249,966 - 12014 mRNA_3646 0.50 -0.2
249,976 - 12014 mRNA_3646 0.52 -0.5
249,982 + 12014 mRNA_3646 0.52 -1.6
250,079 - 12014 mRNA_3646 0.66 -0.0
250,238 - 12014 mRNA_3646 0.88 -0.0
250,246 - 12014 mRNA_3646 0.89 0.6
250,246 - 12014 mRNA_3646 0.89 2.1
250,249 + 12014 mRNA_3646 0.89 -0.4
250,250 - 12014 mRNA_3646 0.89 -0.1
250,254 + 12014 mRNA_3646 0.90 -0.3
250,254 - 12014 mRNA_3646 0.90 -0.0
250,254 + 12014 mRNA_3646 0.90 -0.7
250,255 + 12014 mRNA_3646 0.90 0.4
250,259 - -0.3
250,262 - 0.2
250,263 + -1.6
250,263 + -0.9
250,269 + 0.5
250,298 - -0.6
250,322 + -0.2
250,330 - 1.7
250,346 - -1.0
250,358 + -0.7
250,455 - -0.7
250,464 - -1.4
250,468 + 0.4
250,738 - 0.1
250,758 + -0.3
250,765 + -0.7
251,206 + 12015 mRNA_3647 0.36 1.0
251,312 - 12015 mRNA_3647 0.45 1.0
251,344 + 12015 mRNA_3647 0.48 -0.0
251,621 + 12015 mRNA_3647 0.72 -0.2
252,048 - -2.3
252,197 - -0.2
252,481 - 0.1
252,496 - -0.8
252,505 - 1.0