Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3641

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229768 to 230624 12008 mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997 12009 mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232262 to 233977 12010

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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229,750 - 0.4
229,868 + 12008 mRNA_3640 0.12 0.6
229,870 - 12008 mRNA_3640 0.12 -0.2
229,872 - 12008 mRNA_3640 0.12 1.8
230,158 - 12008 mRNA_3640 0.46 -1.4
230,176 + 12008 mRNA_3640 0.48 -0.5
230,185 - 12008 mRNA_3640 0.49 -0.1
230,218 - 12008 mRNA_3640 0.53 -0.1
230,302 + 12008 mRNA_3640 0.62 0.2
230,308 + 12008 mRNA_3640 0.63 -0.1
230,474 + 12008 mRNA_3640 0.82 1.2
230,495 + 12008 mRNA_3640 0.85 -1.0
230,587 + 0.1
230,605 + 1.6
230,630 + 1.4
230,658 - 1.6
230,915 + 12009 mRNA_3641 0.19 3.1
231,185 + 12009 mRNA_3641 0.39 -0.9
232,059 + -0.6
232,088 + -1.3
232,127 + 0.3
232,146 - -0.1
232,204 + -1.0
232,228 - -2.7