Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3544

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3544: 11912 - K03506 POLE4 DNA polymerase epsilon subunit 4, at 15798 to 16734 11912 mRNA_3545: 11913 - HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906, at 16929 to 18162 11913

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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14,819 - -1.5
14,829 - -0.6
15,476 - -0.1
15,635 - 1.9
15,645 + 1.2
15,651 + -0.0
15,774 - -0.5
15,796 + 0.8
15,799 + 1.1
15,932 + 11912 mRNA_3544 0.14 0.9
15,935 - 11912 mRNA_3544 0.15 1.1
16,231 + 11912 mRNA_3544 0.46 -0.0
16,474 + 11912 mRNA_3544 0.72 -0.6
16,861 + -0.9
16,911 - -0.7
17,096 + 11913 mRNA_3545 0.14 0.9
17,239 - 11913 mRNA_3545 0.25 1.4
17,276 - 11913 mRNA_3545 0.28 -0.3
17,394 - 11913 mRNA_3545 0.38 0.4
17,669 + 11913 mRNA_3545 0.60 0.1