Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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2 + -0.5
2 + 0.2
2 + -0.8
2 + 0.2
2 + -0.2
2 + 0.2
2 + -0.6
14 + 0.0
26 + 0.1
36 + -1.0
39 + -1.3
42 - 0.6
50 + -0.1
50 + 0.9
50 + 0.9
53 - -0.3
57 + 0.1
59 - -0.6
103 + -0.4
104 + 0.9
112 + -0.3
117 - -1.8
120 - 0.2
140 - 0.2
141 + -0.8
146 + -0.7
150 + -1.4
199 - 11905 mRNA_3537 0.12 -1.1
200 + 11905 mRNA_3537 0.12 -0.5
200 - 11905 mRNA_3537 0.12 0.2
200 - 11905 mRNA_3537 0.12 0.1
200 - 11905 mRNA_3537 0.12 -0.0
201 - 11905 mRNA_3537 0.12 -1.4
207 + 11905 mRNA_3537 0.13 -0.2
207 + 11905 mRNA_3537 0.13 -0.8
207 + 11905 mRNA_3537 0.13 -1.3
209 + 11905 mRNA_3537 0.13 0.1
210 + 11905 mRNA_3537 0.13 -0.5
213 + 11905 mRNA_3537 0.14 0.1
213 + 11905 mRNA_3537 0.14 0.1
214 + 11905 mRNA_3537 0.14 -1.5
214 + 11905 mRNA_3537 0.14 -0.1
218 + 11905 mRNA_3537 0.14 -0.5
221 + 11905 mRNA_3537 0.15 0.2
222 + 11905 mRNA_3537 0.15 0.0
222 + 11905 mRNA_3537 0.15 0.2
222 + 11905 mRNA_3537 0.15 -0.6
223 - 11905 mRNA_3537 0.15 -0.8
225 - 11905 mRNA_3537 0.15 -0.2
227 - 11905 mRNA_3537 0.15 -0.5
227 + 11905 mRNA_3537 0.15 -0.5
230 + 11905 mRNA_3537 0.16 1.0
230 + 11905 mRNA_3537 0.16 0.5
246 - 11905 mRNA_3537 0.18 -0.5
246 - 11905 mRNA_3537 0.18 -0.8
251 + 11905 mRNA_3537 0.18 -0.7
252 + 11905 mRNA_3537 0.18 0.9
260 + 11905 mRNA_3537 0.19 0.0
262 + 11905 mRNA_3537 0.20 -0.4
265 - 11905 mRNA_3537 0.20 -0.2
272 - 11905 mRNA_3537 0.21 -0.6
274 + 11905 mRNA_3537 0.21 -0.9
325 - 11905 mRNA_3537 0.27 -0.7
326 - 11905 mRNA_3537 0.27 -0.0
341 + 11905 mRNA_3537 0.29 0.4
359 + 11905 mRNA_3537 0.31 0.3
362 + 11905 mRNA_3537 0.32 0.2
367 - 11905 mRNA_3537 0.32 -0.5
368 + 11905 mRNA_3537 0.33 -0.6
368 + 11905 mRNA_3537 0.33 -0.4
368 + 11905 mRNA_3537 0.33 1.0
373 + 11905 mRNA_3537 0.33 -2.1
373 - 11905 mRNA_3537 0.33 0.2
373 - 11905 mRNA_3537 0.33 0.4
379 + 11905 mRNA_3537 0.34 0.1
380 + 11905 mRNA_3537 0.34 -0.1
417 + 11905 mRNA_3537 0.39 0.0
452 + 11905 mRNA_3537 0.43 -2.2
472 + 11905 mRNA_3537 0.45 1.0
484 + 11905 mRNA_3537 0.47 0.6
489 - 11905 mRNA_3537 0.47 0.1
503 - 11905 mRNA_3537 0.49 -1.3
511 + 11905 mRNA_3537 0.50 -0.7
518 + 11905 mRNA_3537 0.51 0.1
523 + 11905 mRNA_3537 0.52 -0.1
533 + 11905 mRNA_3537 0.53 0.1
539 + 11905 mRNA_3537 0.54 -0.2
550 + 11905 mRNA_3537 0.55 0.3
579 + 11905 mRNA_3537 0.58 -0.4
638 - 11905 mRNA_3537 0.66 -0.5
640 - 11905 mRNA_3537 0.66 -1.0
657 + 11905 mRNA_3537 0.68 0.4
762 - 11905 mRNA_3537 0.81 -0.3
768 + 11905 mRNA_3537 0.82 -1.3
791 - 11905 mRNA_3537 0.84 0.4
801 + 11905 mRNA_3537 0.86 1.3
804 + 11905 mRNA_3537 0.86 -0.1
822 + 11905 mRNA_3537 0.88 0.9
827 + 11905 mRNA_3537 0.89 0.2
842 + 0.9
842 + 0.4
845 - -0.9
962 - 0.1
990 + 0.0
1,074 + 1.5
1,080 - 1.3
1,107 + 0.2
1,110 - -1.3
1,123 + 0.2
1,143 + 0.2
1,256 - -0.3
1,278 + -1.1
1,336 + -0.4
1,371 - 0.4
1,404 - -0.1
1,429 + -0.1
1,450 + 0.2
1,528 + -0.7
1,550 + 0.0
1,647 - 0.1
1,653 + -0.8
1,661 - -1.4
1,663 + -0.4
1,719 + 1.4
1,720 + -0.3
1,760 + 1.5
1,814 - -0.3
1,902 - -0.1