Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3501

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245700 to 248074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835 11869 mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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247,785 + 11868 mRNA_3500 0.88 0.1
247,880 - -0.4
248,273 - 0.2
248,491 - 1.5
248,520 - -0.1
248,614 - 0.2
248,710 - -0.1
248,923 - 11869 mRNA_3501 0.19 0.9
249,119 + 11869 mRNA_3501 0.27 -0.5
249,443 + 11869 mRNA_3501 0.41 -3.4
249,468 + 11869 mRNA_3501 0.42 1.3
249,952 - 11869 mRNA_3501 0.62 -1.3
250,481 + 11869 mRNA_3501 0.85 -1.7
250,615 - -1.3
251,080 + 11870 mRNA_3502 0.34 -0.7
251,513 + -0.7
251,519 - -1.2
251,530 - -1.4
251,644 - 1.5
251,652 + -0.5
251,682 + 0.4
251,774 - 0.9