Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3298

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3297: 11665 - K11173 ADHFE1 hydroxyacid-oxoacid transhydrogenase, at 326501 to 328972 11665 mRNA_3298: 11666 - Hypothetical Protein, at 329367 to 333104 11666 mRNA_3299: 11667 - K19704 PTC1 protein phosphatase PTC1, at 333758 to 335633 11667

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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328,710 + 11665 mRNA_3297 0.89 0.2
329,419 - 0.0
330,273 - 11666 mRNA_3298 0.24 -0.9
330,342 - 11666 mRNA_3298 0.26 0.0
330,893 - 11666 mRNA_3298 0.41 -0.1
331,464 - 11666 mRNA_3298 0.56 -0.1
331,510 + 11666 mRNA_3298 0.57 0.1
331,916 + 11666 mRNA_3298 0.68 -0.9
331,928 - 11666 mRNA_3298 0.69 -1.0
332,089 + 11666 mRNA_3298 0.73 1.8
332,241 + 11666 mRNA_3298 0.77 0.7
332,713 - 11666 mRNA_3298 0.90 -0.5
332,945 + -0.1
333,119 + 0.1
333,290 + -0.9
333,294 + -0.2
333,298 + -0.2
333,309 - -0.4
333,392 - -0.9
333,399 + -1.6
333,591 + -0.0
333,875 + 0.2
333,998 + 11667 mRNA_3299 0.13 0.3