Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3293

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3293: 11661 - K01440 PNC1 nicotinamidase, at 318203 to 319692 11661 mRNA_3294: 11662 - K20368 CNIH, ERV14 protein cornichon, at 319706 to 321575 11662

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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317,285 - 0.5
317,319 + -0.1
317,331 + -0.4
317,418 - -0.4
317,488 + -0.4
317,492 - -1.7
317,788 + -0.6
317,890 + 1.3
317,931 - 1.3
317,946 - 1.2
317,954 - 0.5
318,113 + -0.2
318,128 + -1.5
318,137 - 0.2
318,148 + -0.5
318,234 - 0.6
318,248 - -0.1
318,249 + -0.6
318,255 + 0.1
318,257 - 0.5
318,257 + 0.5
318,271 - -0.0
318,272 + -0.0
318,277 + -0.2
318,417 - 11661 mRNA_3293 0.14 0.7
318,425 + 11661 mRNA_3293 0.15 -3.2
318,431 + 11661 mRNA_3293 0.15 -0.4
318,435 + 11661 mRNA_3293 0.16 -0.3
318,451 + 11661 mRNA_3293 0.17 -0.2
318,454 + 11661 mRNA_3293 0.17 0.3
318,574 - 11661 mRNA_3293 0.25 -0.5
318,577 - 11661 mRNA_3293 0.25 -2.6
318,690 - 11661 mRNA_3293 0.33 -1.7
318,773 + 11661 mRNA_3293 0.38 0.8
318,774 + 11661 mRNA_3293 0.38 1.4
319,142 - 11661 mRNA_3293 0.63 -3.0
319,157 + 11661 mRNA_3293 0.64 -0.0
319,309 + 11661 mRNA_3293 0.74 -0.2
319,322 - 11661 mRNA_3293 0.75 -0.9
319,333 + 11661 mRNA_3293 0.76 -2.0
319,334 + 11661 mRNA_3293 0.76 -1.3
319,853 + -1.5