Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3104

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328830 to 331254 11471 mRNA_3104: 11472 - HMMPfam-Uncharacterized conserved protein (DUF2156)-PF09924, at 331820 to 333279 11472

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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330,999 + 11471 mRNA_3103 0.89 0.7
331,303 - 0.1
331,419 + 0.6
331,430 + -0.2
331,584 - -3.0
331,593 + -2.1
331,859 + -0.3
331,864 + 1.4
331,875 - -0.1
331,877 + -0.8
332,159 - 11472 mRNA_3104 0.23 -0.8
332,167 + 11472 mRNA_3104 0.24 0.1
332,298 + 11472 mRNA_3104 0.33 0.3
332,611 + 11472 mRNA_3104 0.54 -0.0
332,657 - 11472 mRNA_3104 0.57 1.5
332,721 - 11472 mRNA_3104 0.62 -0.9
332,721 + 11472 mRNA_3104 0.62 -2.0
332,842 + 11472 mRNA_3104 0.70 -0.8
332,857 - 11472 mRNA_3104 0.71 -0.2
332,864 + 11472 mRNA_3104 0.72 0.0
333,022 + 11472 mRNA_3104 0.82 -1.1
333,029 - 11472 mRNA_3104 0.83 -0.5
333,033 - 11472 mRNA_3104 0.83 -1.5
333,035 + 11472 mRNA_3104 0.83 -0.5
333,148 - -0.4
333,182 + 0.2
333,284 - 0.1
333,289 + -3.2
333,315 + -0.1
333,315 - 2.4
333,322 - -1.2
333,324 + 0.4
333,342 - -0.3
333,364 + -0.3
333,366 + -0.8
333,470 + 0.2
333,471 + -0.5
333,472 - -1.8
333,472 + 0.4
333,475 - -0.3
333,480 - -0.4
333,481 + -0.3
333,482 - 0.6
333,484 - -0.5
333,485 - 0.1
333,485 + 0.3
333,486 - 0.1
333,487 - -0.1
333,489 + -0.6
333,489 - 0.1
333,489 + -0.4
333,489 + -0.1
333,493 + -0.4
333,499 - -0.3
333,500 + 1.6
333,501 + 0.2
333,501 + -0.4
333,502 + 0.2
333,514 + -1.3
333,516 - -1.6
333,518 - 2.5
333,519 + -0.1
333,520 + -0.1
333,523 - 1.1
333,523 + -0.5
333,532 - 0.5
333,537 + -0.1
333,554 - 1.0
333,582 + 1.5
333,646 - -0.2
333,648 - 0.2
333,653 + 0.1
333,657 + 0.1
333,657 + -1.1
333,662 + -0.0
333,663 - -0.5
333,663 - -0.1
333,664 - 0.2
333,664 + 0.3
333,665 + 1.7
333,666 - -0.8
333,667 - -0.4
333,674 - 0.9
333,675 - -0.1
333,676 - -0.1
333,676 + -1.6
333,676 + -0.8
333,681 - 0.3
333,705 + -1.1
333,706 - 0.4
333,706 - 0.2
333,706 - -0.5
333,706 - 0.1
333,707 - 1.4
333,708 - 0.5
333,708 - 0.1
333,708 - 0.6
333,718 + 0.6
333,718 - 0.2
333,720 - -1.0
333,729 - -1.1
333,730 - -0.0
333,733 - 0.8
333,735 + -0.0
333,749 + 0.7
333,754 - 0.0
333,767 - -2.3
333,768 + -0.5
333,783 + 0.6
333,788 + -1.2
333,798 + -0.3
333,843 + -0.1
333,889 - 0.7
333,889 - 0.6
333,905 - 0.1
333,905 - -0.8
333,906 + 0.6
333,910 - -0.5
333,914 - -0.5
333,915 + 1.0
333,920 + -0.6
333,923 + -0.2
333,925 - 0.4
333,929 + -0.5
333,968 + 0.2
334,021 + 0.3
334,045 - -0.2
334,073 + -0.9
334,086 - -1.4
334,088 + -0.8
334,089 + -0.5
334,107 + -0.1
334,117 + -2.1
334,195 - 0.2
334,207 - -0.3
334,214 - -0.2
334,214 - 0.0
334,217 - 0.6
334,225 + -0.0
334,227 + 2.1
334,228 + 0.5
334,234 - -1.1
334,246 - -0.8
334,248 - 0.2
334,249 + 0.5
334,253 - -0.5
334,259 + -0.0