Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3052

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3051: 11419 - Hypothetical Protein, at 198929 to 201085 11419 mRNA_3052: 11420 - KOG2404 Fumarate reductase, flavoprotein subunit, at 201580 to 204661 11420 mRNA_3053: 11421 - K06889 K06889 uncharacterized protein, at 205361 to 206848 11421

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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200,775 - 11419 mRNA_3051 0.86 0.8
201,924 + 11420 mRNA_3052 0.11 -0.8
202,205 - 11420 mRNA_3052 0.20 0.1
202,319 + 11420 mRNA_3052 0.24 0.4
202,536 - 11420 mRNA_3052 0.31 0.2
202,544 + 11420 mRNA_3052 0.31 -0.9
202,717 - 11420 mRNA_3052 0.37 -0.2
202,811 - 11420 mRNA_3052 0.40 -2.0
202,954 - 11420 mRNA_3052 0.45 0.4
202,967 - 11420 mRNA_3052 0.45 -0.5
203,010 - 11420 mRNA_3052 0.46 -0.2
203,090 - 11420 mRNA_3052 0.49 -0.8
203,364 + 11420 mRNA_3052 0.58 -0.6
203,854 - 11420 mRNA_3052 0.74 1.0
203,879 - 11420 mRNA_3052 0.75 -1.2
203,980 + 11420 mRNA_3052 0.78 0.4
203,993 + 11420 mRNA_3052 0.78 -1.1
204,138 - 11420 mRNA_3052 0.83 -2.0
204,225 + 11420 mRNA_3052 0.86 -0.2
204,292 + 11420 mRNA_3052 0.88 -0.2
204,330 + 11420 mRNA_3052 0.89 -1.4
204,335 + 11420 mRNA_3052 0.89 -0.5
204,341 + 11420 mRNA_3052 0.90 -0.1
204,346 + 11420 mRNA_3052 0.90 -0.5
204,386 - -1.0
204,389 - -0.4
204,390 + -1.0
204,393 - 0.4
204,396 + 0.2
204,398 - -1.6
204,399 - -2.3
204,404 - -0.9
204,411 + -1.0
204,411 - -0.4
204,412 + -0.4
204,412 - -1.0
204,427 - 0.3
204,428 + -1.0
204,436 - -0.1
204,438 - 0.1
204,463 + -1.7
204,479 + -2.4
204,531 - -0.8
204,534 - 0.4
204,544 - -1.3
204,547 + -0.4
204,553 - -1.8
204,575 - 0.1
204,692 + 2.5
204,728 + -2.1
204,868 + -1.9
204,881 - 0.4
204,890 + 0.0
204,900 + -0.5
204,904 + -0.3
204,998 + -0.8
205,022 - -1.1
205,028 - -0.6
205,028 - 0.2
205,029 + -0.4
205,043 - 0.4
205,047 + -0.4
205,047 + -0.4
205,050 - 1.0
205,051 - 0.8
205,054 + 0.1
205,056 + 0.2
205,057 - -0.7
205,062 + -3.0
205,067 + -0.1
205,068 + 0.0
205,068 + -1.0
205,068 + -0.1
205,070 + 0.4
205,070 + 0.5
205,076 + 1.5
205,077 + -2.7
205,081 + -1.6
205,088 - -0.1
205,091 + -0.2
205,091 - -0.4
205,094 + 0.1
205,104 - -0.4
205,104 + -0.4
205,136 - -0.1
205,144 + -0.9
205,147 - -0.2
205,157 - -0.9
205,158 - -0.5
205,159 - 0.8
205,163 - 0.0
205,269 - -0.4
205,285 - 0.1
205,310 - -0.6
205,312 - 0.4
205,326 - 0.2
205,329 - -0.0
205,330 + -0.0
205,589 - 11421 mRNA_3053 0.15 -0.6
205,592 - 11421 mRNA_3053 0.16 -0.2
205,594 + 11421 mRNA_3053 0.16 -0.7
205,595 + 11421 mRNA_3053 0.16 0.3
205,597 + 11421 mRNA_3053 0.16 0.5
205,612 + 11421 mRNA_3053 0.17 0.4