Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1 + 0.5
1 + -0.6
1 + 0.0
21 + 0.3
21 + 1.1
21 + -1.6
41 + 0.2
42 + -0.8
44 + 0.3
79 - 0.3
79 + 0.3
149 - 3.3
264 + 11348 mRNA_2980 0.17 -0.1
266 - 11348 mRNA_2980 0.17 1.2
338 - 11348 mRNA_2980 0.22 0.1
341 + 11348 mRNA_2980 0.22 0.7
454 - 11348 mRNA_2980 0.30 0.6
484 - 11348 mRNA_2980 0.32 -1.6
489 - 11348 mRNA_2980 0.33 0.0
491 + 11348 mRNA_2980 0.33 -0.0
507 + 11348 mRNA_2980 0.34 2.0
510 + 11348 mRNA_2980 0.34 -0.1
516 - 11348 mRNA_2980 0.35 0.6
654 + 11348 mRNA_2980 0.44 0.5
719 + 11348 mRNA_2980 0.49 0.9
1,007 + 11348 mRNA_2980 0.69 0.3
1,048 - 11348 mRNA_2980 0.72 -0.3
1,218 - 11348 mRNA_2980 0.84 -0.1
1,248 + 11348 mRNA_2980 0.86 0.7
1,364 + 1.2
1,374 - -0.3
1,401 + 0.0
1,452 + 1.0
1,488 - 0.1
1,503 + 1.3
1,513 + -0.6
1,515 - -0.6
1,551 + 0.4
1,634 + 0.0
1,635 + 0.1
1,657 + -0.3
1,668 + -0.4
1,805 - -0.3
1,805 + 0.3
1,818 + -0.2
1,882 + 0.0
1,934 + 0.1
1,948 + -0.4
1,949 - 0.4
1,974 + -0.7
1,992 + 0.5
1,992 + 0.6
1,993 + 0.2
2,011 + 0.1
2,082 + -0.1
2,084 - -1.7
2,086 + 1.3
2,086 + -1.4
2,086 + 1.0
2,095 + 0.1
2,097 - -1.4
2,098 + 0.4
2,115 + 0.3
2,117 + -0.7
2,120 + -0.1
2,121 - 0.0
2,121 - -0.7
2,125 - 0.4
2,126 + 0.5
2,131 + -1.0
2,131 + 0.8
2,131 + -0.4
2,133 + 0.4
2,243 + -1.3
2,265 + -0.5
2,301 + -1.2
2,320 + -0.2
2,324 - -0.1
2,357 + -0.1