Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2822

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2821: 11189 - BLAST DNA polymerase gamma [Kalmanozyma brasiliensis GH..., at 300473 to 301385 11189 mRNA_2822: 11190 - SUPERFAMILY--SSF52047, at 301729 to 303000 11190 mRNA_2823: 11191 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 303480 to 304770 11191

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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302,659 - 11190 mRNA_2822 0.73 1.2
303,362 + 0.4
303,509 + 0.5
303,567 + 0.1
303,671 - 11191 mRNA_2823 0.15 0.7
303,757 - 11191 mRNA_2823 0.21 0.0
303,782 - 11191 mRNA_2823 0.23 -0.6
303,796 + 11191 mRNA_2823 0.24 0.5
303,939 - 11191 mRNA_2823 0.36 0.3
303,945 + 11191 mRNA_2823 0.36 -1.1
303,952 - 11191 mRNA_2823 0.37 0.9
303,962 + 11191 mRNA_2823 0.37 -0.4
303,964 + 11191 mRNA_2823 0.37 -0.0