Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2815

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2814: 11182 - Hypothetical Protein, at 285527 to 286439 11182 mRNA_2815: 11183 - K09699 DBT, bkdB 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase), at 286881 to 288952 11183 mRNA_2816: 11184 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785, at 289258 to 289809 11184

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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288,699 + 11183 mRNA_2815 0.88 -1.4
288,825 - 1.0
289,108 - -2.2
289,182 - 0.1
289,297 + -1.2
289,468 - 11184 mRNA_2816 0.38 -0.2
289,475 - 11184 mRNA_2816 0.39 -0.4
289,478 - 11184 mRNA_2816 0.40 -0.6
289,571 - 11184 mRNA_2816 0.57 -0.4