Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2808

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2807: 11175 - K11485 MTF2, PCL2 polycomb-like protein 2, at 267312 to 269571 11175 mRNA_2808: 11176 - KOG4539 Uncharacterized conserved protein, at 269906 to 271117 11176 mRNA_2809: 11177 - K08596 SENP7 sentrin-specific protease 7, at 271552 to 278521 11177

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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269,167 + 11175 mRNA_2807 0.82 0.6
269,190 + 11175 mRNA_2807 0.83 0.1
269,315 + 11175 mRNA_2807 0.89 0.8
269,330 + 11175 mRNA_2807 0.89 -0.5
269,456 + 0.0
269,480 - 0.3
269,489 - -0.2
269,603 - 0.6
269,734 + -0.3
269,759 + 1.2
269,822 + -0.4
269,876 - 0.1
269,879 - -1.4
269,910 + -0.3
269,913 - -0.3
270,045 - 11176 mRNA_2808 0.11 0.0
270,182 + 11176 mRNA_2808 0.23 -0.4
270,184 - 11176 mRNA_2808 0.23 -1.5
270,206 - 11176 mRNA_2808 0.25 -1.9
270,469 + 11176 mRNA_2808 0.46 -0.2
270,594 + 11176 mRNA_2808 0.57 -2.1
270,639 - 11176 mRNA_2808 0.60 -0.5
271,064 + -0.4
271,078 + 0.0
271,204 - 0.9
271,223 + -0.7
271,356 + 0.4
271,363 - -0.2
271,512 + -0.2
271,552 - -2.7
271,786 - -0.8