Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2782

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2782: 11150 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 198574 to 201487 11150 mRNA_2783: 11151 - BLAST NADH dehydrogenase (ubiquinone) Fe-S protein 5 [C..., at 202335 to 202970 11151

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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197,581 + -0.8
197,609 - -0.3
197,660 - -0.4
197,676 + -1.0
197,679 + 1.7
197,687 - 0.5
197,702 + 1.1
197,721 - -0.7
197,721 + 0.6
197,746 - 0.2
197,823 + 0.0
197,828 - 0.8
197,960 - -0.2
197,971 - -0.7
197,975 - 0.4
197,976 - 0.9
197,982 + -0.0
197,986 - 0.2
197,988 - 1.3
197,990 - -0.1
198,009 + 0.6
198,010 + -0.3
198,019 - 0.2
198,023 + -0.2
198,025 - 3.6
198,139 + -0.5
198,151 + -0.7
198,159 - 0.0
198,306 - 0.6
198,310 - -0.6
198,321 + -0.2
198,331 - 0.8
198,337 + 0.3
198,468 + -0.5
198,491 + 0.4
198,510 + 0.2
199,391 - 11150 mRNA_2782 0.28 0.5
200,132 - 11150 mRNA_2782 0.53 -0.2
201,016 + 11150 mRNA_2782 0.84 0.1
201,285 - -1.0
201,566 - 0.2
201,864 - -0.7
201,867 - 0.3
201,877 - -0.1
201,878 + -1.0
201,878 + 0.7
201,894 + -0.1
202,018 - -0.4
202,020 + 0.7
202,030 + -1.7
202,038 - -0.2
202,041 + -2.0
202,042 + -0.1