Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2628

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996 mRNA_2629: 10997 - Hypothetical Protein, at 628565 to 629191 10997

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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624,948 - 10995 mRNA_2627 0.66 -1.5
625,525 + -0.9
625,526 + -0.0
625,531 + -0.4
625,652 - 0.0
625,658 - -0.2
625,663 + -0.2
625,675 + 0.2
625,692 + -0.4
625,816 - -0.6
625,821 + 0.4
625,831 + 0.4
625,942 - 0.2
626,101 + -0.8
626,398 - 10996 mRNA_2628 0.21 0.7
626,537 + 10996 mRNA_2628 0.27 -0.6
626,542 + 10996 mRNA_2628 0.27 0.9
626,548 + 10996 mRNA_2628 0.28 -0.4
626,564 + 10996 mRNA_2628 0.28 -0.4
626,686 - 10996 mRNA_2628 0.34 0.1
626,720 + 10996 mRNA_2628 0.35 -0.8
627,422 + 10996 mRNA_2628 0.67 0.1
627,437 + 10996 mRNA_2628 0.67 0.3
627,582 + 10996 mRNA_2628 0.74 -0.1
627,845 - 10996 mRNA_2628 0.86 0.4
628,056 - -1.4
628,154 + -0.7
628,203 - -0.4
628,220 - 0.0
628,281 - -0.6
628,477 - -0.8
628,531 - 0.3
628,717 - 10997 mRNA_2629 0.24 0.7
628,805 - 10997 mRNA_2629 0.38 0.7
628,947 + 10997 mRNA_2629 0.61 -0.2
628,970 - 10997 mRNA_2629 0.65 -1.2
628,971 - 10997 mRNA_2629 0.65 -0.8
629,017 - 10997 mRNA_2629 0.72 -0.5
629,095 - 10997 mRNA_2629 0.85 -0.3
629,107 - 10997 mRNA_2629 0.86 0.5
629,121 - 10997 mRNA_2629 0.89 -0.1
629,130 + 1.5
629,155 - -1.3