Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2417

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785 mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77070 to 79296 10786

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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74,016 + 10784 mRNA_2416 0.76 0.2
74,257 + 10784 mRNA_2416 0.85 -0.1
74,478 + 0.1
74,481 + 0.5
74,542 - -0.3
74,605 + 0.9
74,777 - -0.7
75,237 + 10785 mRNA_2417 0.34 1.8
75,400 + 10785 mRNA_2417 0.46 1.3
75,428 + 10785 mRNA_2417 0.48 -0.5
75,987 - 0.8
76,075 - 0.0
76,116 - -0.9
76,120 - 0.1
76,168 - -1.6
76,252 - 0.9
76,258 - -0.1
76,267 + -0.6
76,425 - -0.1
76,446 + -0.4
76,447 - 1.0
76,460 + 0.7
76,557 - 0.9
76,594 - -1.5
76,974 + 1.1