Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2307

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2306: 10674 - HMMPfam-ATP synthase complex subunit h-PF10775, at 570737 to 571864 10674 mRNA_2307: 10675 - HMMPfam-Mitochondrial ATPase inhibitor, IATP-PF04568,SUPERFAMILY--SSF64602, at 572291 to 573066 10675 mRNA_2308: 10676 - ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 573284 to 575347 10676

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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571,899 + 0.2
571,916 - -0.2
571,919 - -0.7
571,920 - 0.1
571,922 + 1.2
571,930 - -1.0
572,085 - -0.1
572,087 + -1.4
572,090 + 0.2
572,090 + -0.1
572,099 - -0.3
572,100 - -2.0
572,103 - -0.6
572,104 - 1.0
572,105 + -0.1
572,106 + -0.2
572,106 + -0.8
572,109 + 0.7
572,227 + -0.4
572,228 + 0.4
572,230 - -2.0
572,232 + 0.1
572,241 + -0.3
572,256 - -0.2
572,291 + -2.3
572,363 + 0.7
572,416 + 10675 mRNA_2307 0.16 0.9
572,417 + 10675 mRNA_2307 0.16 -0.4
572,421 - 10675 mRNA_2307 0.17 -0.6
572,423 - 10675 mRNA_2307 0.17 -0.3
572,431 - 10675 mRNA_2307 0.18 0.1
572,441 + 10675 mRNA_2307 0.19 -0.1
572,449 + 10675 mRNA_2307 0.20 0.2
572,469 + 10675 mRNA_2307 0.23 1.5
572,666 - 10675 mRNA_2307 0.48 -0.0
572,800 + 10675 mRNA_2307 0.66 -0.1
572,979 - 10675 mRNA_2307 0.89 0.6
573,011 - 0.5
573,132 + -0.6
573,138 - 0.5
573,138 + -0.2
573,178 + 0.0
573,180 - -0.6
573,181 + 0.2
573,183 + 0.5
573,189 + -0.6
573,189 + -0.8
573,192 - -1.4
573,196 - -0.7
573,198 - -0.3
573,198 + 0.7
573,199 + 0.6
573,203 - -0.6
573,206 + 0.1
573,212 + -0.2
573,214 - -0.1
573,220 - 0.4
573,230 + 0.6
573,233 + 1.6
573,236 - 0.0
573,236 + -0.4
573,248 - -1.5
573,338 - 0.1
573,346 - 0.5
573,363 + 0.0
573,373 - -0.2
573,376 + -0.9
573,487 - 0.1
573,496 - 10676 mRNA_2308 0.10 -1.1
573,501 - 10676 mRNA_2308 0.11 1.4
573,506 - 10676 mRNA_2308 0.11 0.3
573,519 + 10676 mRNA_2308 0.11 0.1
573,600 - 10676 mRNA_2308 0.15 0.0
573,665 - 10676 mRNA_2308 0.18 -0.3