Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2242

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2241: 10609 - K12572 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit 3, at 444470 to 447596 10609 mRNA_2242: 10610 - Hypothetical Protein, at 448063 to 449685 10610 mRNA_2243: 10611 - SUPERFAMILY--SSF52266, at 450168 to 452098 10611

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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447,221 - 10609 mRNA_2241 0.88 0.2
447,245 - 10609 mRNA_2241 0.89 0.0
447,345 - -0.5
447,532 - -0.7
447,548 - 0.3
447,585 + -1.7
447,666 + 0.4
447,666 + 1.5
447,667 - -0.6
447,669 + 0.8
447,671 - -2.0
447,683 - 0.2
447,689 - -0.0
447,800 + -0.8
447,808 + 1.8
447,811 - 0.5
447,840 - 1.0
447,884 + -1.3
447,892 + 0.7
447,928 + 1.0
448,015 - 1.3
448,031 - 0.4
448,043 - 0.0
448,044 + -0.3
448,044 - -0.9
448,053 - -1.8
448,073 + -0.5
448,183 + -0.4
448,184 + 0.1
448,210 + -0.0
448,217 + -0.1
448,240 - 10610 mRNA_2242 0.11 0.3
448,247 - 10610 mRNA_2242 0.11 -0.7
448,329 - 10610 mRNA_2242 0.16 0.7
448,335 + 10610 mRNA_2242 0.17 -0.5
448,339 - 10610 mRNA_2242 0.17 0.6
448,353 + 10610 mRNA_2242 0.18 -0.5
448,353 + 10610 mRNA_2242 0.18 -0.7
448,358 - 10610 mRNA_2242 0.18 0.2
448,364 - 10610 mRNA_2242 0.19 -1.0
448,384 + 10610 mRNA_2242 0.20 0.5
448,403 - 10610 mRNA_2242 0.21 -0.6
448,446 + 10610 mRNA_2242 0.24 -0.5
448,478 + 10610 mRNA_2242 0.26 -1.7
448,483 - 10610 mRNA_2242 0.26 0.5
448,494 + 10610 mRNA_2242 0.27 0.4
448,497 - 10610 mRNA_2242 0.27 0.3
448,502 + 10610 mRNA_2242 0.27 -0.1
448,507 + 10610 mRNA_2242 0.27 -0.0
448,609 - 10610 mRNA_2242 0.34 0.2
448,611 - 10610 mRNA_2242 0.34 -0.6
448,623 + 10610 mRNA_2242 0.35 -0.5
448,640 + 10610 mRNA_2242 0.36 0.5
448,647 - 10610 mRNA_2242 0.36 -1.4
448,656 + 10610 mRNA_2242 0.37 -1.1
448,662 - 10610 mRNA_2242 0.37 0.1
448,851 + 10610 mRNA_2242 0.49 0.9
448,940 + 10610 mRNA_2242 0.54 0.3
448,967 - 10610 mRNA_2242 0.56 0.4
449,089 + 10610 mRNA_2242 0.63 0.8
449,091 - 10610 mRNA_2242 0.63 0.4
449,101 + 10610 mRNA_2242 0.64 0.1
449,241 + 10610 mRNA_2242 0.73 -1.9
449,423 - 10610 mRNA_2242 0.84 0.6
449,680 + 2.6
449,698 + -0.1
449,833 + 0.3
449,996 + 0.3
450,014 - 0.1
450,306 + 0.3
450,420 + 10611 mRNA_2243 0.13 -3.2
450,572 + 10611 mRNA_2243 0.21 -0.5