Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2099

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2098: 10466 - Hypothetical Protein, at 63765 to 64899 10466 mRNA_2099: 10467 - HMMPfam-PWWP domain-PF00855,SUPERFAMILY--SSF63748, at 65329 to 67842 10467 mRNA_2100: 10468 - K13184 DHX9 ATP-dependent RNA helicase A, at 68093 to 72993 10468

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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64,464 - 10466 mRNA_2098 0.62 0.5
64,467 - 10466 mRNA_2098 0.62 0.5
64,518 - 10466 mRNA_2098 0.66 0.7
64,544 + 10466 mRNA_2098 0.69 -0.2
64,714 + 10466 mRNA_2098 0.84 1.0
64,852 - -0.9
64,893 + -1.1
65,255 + -1.9
65,327 + -0.3
65,402 + -0.4
65,503 + -1.5
65,560 + -0.2
65,660 + 10467 mRNA_2099 0.13 -0.4
65,736 + 10467 mRNA_2099 0.16 -0.7
65,739 - 10467 mRNA_2099 0.16 0.1
65,837 - 10467 mRNA_2099 0.20 1.4
65,981 - 10467 mRNA_2099 0.26 -0.1
67,014 - 10467 mRNA_2099 0.67 0.2
67,149 + 10467 mRNA_2099 0.72 0.3
67,640 - 0.4
67,662 + -0.1
67,752 + -1.2
67,771 - -1.2
67,789 + -0.6
67,847 + 0.2
67,894 - 0.9
67,900 - -2.0
67,903 - -0.9
67,907 + 0.5
68,035 - 0.2
68,064 + -0.5
68,077 - 0.5
68,169 - 1.8
68,338 - -0.8