Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1754

Experiments: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1753: 10121 - BLAST ubiquitin ligase SCF complex subunit Cullin [Rhizocto..., at 119508 to 121647 10121 mRNA_1754: 10122 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 121684 to 123500 10122 mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123629 to 124708 10123

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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120,725 - 10121 mRNA_1753 0.57 -0.0
120,809 + 10121 mRNA_1753 0.61 -1.2
120,922 - 10121 mRNA_1753 0.66 -0.7
121,244 + 10121 mRNA_1753 0.81 -1.2
121,444 - 1.0
121,599 - -0.9
121,731 - -0.5
121,748 - 0.5
121,884 + 10122 mRNA_1754 0.11 -0.0
122,037 - 10122 mRNA_1754 0.19 -0.8
122,054 + 10122 mRNA_1754 0.20 -1.7
122,152 - 10122 mRNA_1754 0.26 -0.3
122,240 + 10122 mRNA_1754 0.31 0.0
122,460 - 10122 mRNA_1754 0.43 -0.3
122,461 + 10122 mRNA_1754 0.43 -0.2
122,485 + 10122 mRNA_1754 0.44 -0.6
122,505 + 10122 mRNA_1754 0.45 0.5
122,517 + 10122 mRNA_1754 0.46 0.8
122,518 + 10122 mRNA_1754 0.46 0.4
122,859 - 10122 mRNA_1754 0.65 1.7
122,878 + 10122 mRNA_1754 0.66 -0.3
122,914 - 10122 mRNA_1754 0.68 1.0
123,206 - 10122 mRNA_1754 0.84 -0.8
123,219 + 10122 mRNA_1754 0.84 -0.6
123,328 + 0.5
123,467 + -2.2
123,470 - -0.9
123,767 - 10123 mRNA_1755 0.13 1.7
123,924 + 10123 mRNA_1755 0.27 2.5
123,926 + 10123 mRNA_1755 0.28 2.1
123,934 - 10123 mRNA_1755 0.28 2.3
123,942 + 10123 mRNA_1755 0.29 2.3
124,349 - 10123 mRNA_1755 0.67 1.6
124,497 + 10123 mRNA_1755 0.80 1.8