Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1660

Experiments: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1659: 10027 - K08741 MSH5 DNA mismatch repair protein MSH5, at 828859 to 833266 10027 mRNA_1660: 10028 - Hypothetical Protein, at 833434 to 834294 10028 mRNA_1661: 10029 - K13979 yahK uncharacterized zinc-type alcohol dehydrogenase-like protein, at 834385 to 835559 10029

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
832,455 - 10027 mRNA_1659 0.82 0.5
832,595 + 10027 mRNA_1659 0.85 0.1
832,635 - 10027 mRNA_1659 0.86 0.6
832,738 - 10027 mRNA_1659 0.88 -1.5
832,785 + 10027 mRNA_1659 0.89 0.6
832,895 - -0.5
833,026 + -0.5
833,027 - -0.7
833,066 - -1.3
833,193 - -0.5
833,328 - 0.4
833,332 - -0.1
833,345 - 0.5
833,370 + 0.4
833,471 + -2.0
833,506 + -0.2
833,523 - 10028 mRNA_1660 0.10 -1.1
833,659 + 10028 mRNA_1660 0.26 -1.8
833,805 + 10028 mRNA_1660 0.43 1.0
833,930 + 10028 mRNA_1660 0.58 -0.5
833,931 - 10028 mRNA_1660 0.58 0.0
834,479 - -0.3
834,543 - 10029 mRNA_1661 0.13 0.3
834,553 + 10029 mRNA_1661 0.14 -0.8
834,634 + 10029 mRNA_1661 0.21 -0.4
834,974 - 10029 mRNA_1661 0.50 0.0
835,255 + 10029 mRNA_1661 0.74 -0.9