Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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821,706 - -0.4
821,717 - 0.8
821,730 + -0.3
821,744 + -0.9
821,748 + 0.1
821,752 - -0.5
821,755 + 0.9
821,764 + -0.9
821,835 + 0.7
821,887 + -0.2
821,911 + -1.0
821,919 + 0.1
821,919 + 0.5
821,921 + -0.3
821,922 - 1.0
821,923 - 0.1
821,923 + 0.1
821,924 + -0.7
821,927 + -1.7
821,928 + -0.2
821,929 - -0.7
821,931 + -0.6
821,939 - 0.1
821,940 - -0.7
821,941 - -0.6
821,941 + -0.7
821,965 + 0.1
821,970 - -2.1
821,975 - -0.0
821,983 - 0.2
821,996 - -1.4
822,000 - 0.8
822,004 - -2.7
822,005 - -0.4
822,091 - -0.9
822,179 - -0.3
822,180 + -0.1
822,189 - -0.3
822,208 - -1.9
822,214 - -0.8
822,214 - -1.9
822,231 - -0.2
822,235 - 0.7
822,242 + -0.5
822,242 + -1.6
822,249 + -0.9
822,250 + 1.3
822,257 - -0.2
822,259 + -0.2
822,262 + -0.4
822,266 - 1.1
822,375 + -0.2
822,377 + -1.1
823,107 - 9647 mRNA_1279 0.29 0.1
823,108 + 9647 mRNA_1279 0.29 1.1
823,119 + 9647 mRNA_1279 0.30 0.1
823,440 - 9647 mRNA_1279 0.50 0.1
823,448 + 9647 mRNA_1279 0.50 -0.2
823,697 - 9647 mRNA_1279 0.65 -0.4
823,735 + 9647 mRNA_1279 0.68 0.7
824,015 + 9647 mRNA_1279 0.85 1.2
824,386 - -0.1
824,792 - -2.1
824,796 + 0.4
824,800 + -0.8
824,821 + -1.6
824,821 + -3.1
824,866 + -1.0
824,874 - -0.4
824,874 + -1.6
824,894 + 0.3
825,013 + -0.8
825,046 - -0.2
825,053 + 0.0
825,054 - -0.4
825,095 - -0.2
825,116 - -0.8
825,141 + -1.3
825,141 + -2.0
825,178 - 0.1
825,184 - -0.0
825,190 + -1.2
825,191 - -1.1
825,193 - -0.1
825,198 + -1.0
825,200 - -2.1
825,206 + -0.0
825,211 + -0.9
825,211 + -1.4
825,224 - -1.2
825,241 - 0.6
825,243 + 1.1
825,244 - -0.8
825,245 - -2.0